Protein–RNA interactions for Protein: O15255

RTL8C, CAAX box protein 1, humanhuman

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL8CO15255 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
RTL8CO15255 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC11.51□□□□□ -0.57
RTL8CO15255 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC11.51□□□□□ -0.57
RTL8CO15255 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC11.51□□□□□ -0.57
RTL8CO15255 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
RTL8CO15255 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC11.51□□□□□ -0.57
RTL8CO15255 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
RTL8CO15255 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
RTL8CO15255 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
RTL8CO15255 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
RTL8CO15255 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
RTL8CO15255 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
RTL8CO15255 AC100803.2-201ENST00000562459 1963 ntBASIC11.51□□□□□ -0.57
RTL8CO15255 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
RTL8CO15255 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
RTL8CO15255 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
RTL8CO15255 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
RTL8CO15255 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
RTL8CO15255 AC015922.1-201ENST00000421102 1152 ntBASIC11.51□□□□□ -0.57
RTL8CO15255 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC11.51□□□□□ -0.57
RTL8CO15255 AC005034.1-201ENST00000426657 489 ntBASIC11.51□□□□□ -0.57
RTL8CO15255 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC11.51□□□□□ -0.57
RTL8CO15255 AC067863.1-201ENST00000494933 530 ntBASIC11.51□□□□□ -0.57
RTL8CO15255 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC11.51□□□□□ -0.57
RTL8CO15255 NMU-203ENST00000507338 658 ntTSL 3 BASIC11.51□□□□□ -0.57
RTL8CO15255 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC11.51□□□□□ -0.57
RTL8CO15255 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
RTL8CO15255 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
RTL8CO15255 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC11.51□□□□□ -0.57
RTL8CO15255 RBM7-207ENST00000544582 692 ntTSL 3 BASIC11.51□□□□□ -0.57
RTL8CO15255 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC11.51□□□□□ -0.57
RTL8CO15255 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC11.51□□□□□ -0.57
RTL8CO15255 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC11.51□□□□□ -0.57
RTL8CO15255 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC11.51□□□□□ -0.57
RTL8CO15255 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC11.51□□□□□ -0.57
RTL8CO15255 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC11.51□□□□□ -0.57
RTL8CO15255 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC11.51□□□□□ -0.57
RTL8CO15255 AL035252.4-201ENST00000624174 288 ntBASIC11.51□□□□□ -0.57
RTL8CO15255 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
RTL8CO15255 TNXA-203ENST00000507684 2038 ntBASIC11.51□□□□□ -0.57
RTL8CO15255 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC11.51□□□□□ -0.57
RTL8CO15255 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC11.51□□□□□ -0.57
RTL8CO15255 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC11.51□□□□□ -0.57
RTL8CO15255 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
RTL8CO15255 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC11.51□□□□□ -0.57
RTL8CO15255 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
RTL8CO15255 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC11.51□□□□□ -0.57
RTL8CO15255 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
RTL8CO15255 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
RTL8CO15255 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
RTL8CO15255 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
RTL8CO15255 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC11.51□□□□□ -0.57
RTL8CO15255 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
RTL8CO15255 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
RTL8CO15255 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC11.51□□□□□ -0.57
RTL8CO15255 AC098818.2-201ENST00000564925 2320 ntBASIC11.51□□□□□ -0.57
RTL8CO15255 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC11.5□□□□□ -0.57
RTL8CO15255 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
RTL8CO15255 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
RTL8CO15255 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
RTL8CO15255 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
RTL8CO15255 AC093503.3-201ENST00000624917 2352 ntBASIC11.5□□□□□ -0.57
RTL8CO15255 BX276092.7-203ENST00000637198 1536 ntBASIC11.5□□□□□ -0.57
RTL8CO15255 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
RTL8CO15255 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
RTL8CO15255 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC11.5□□□□□ -0.57
RTL8CO15255 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
RTL8CO15255 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC11.5□□□□□ -0.57
RTL8CO15255 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
RTL8CO15255 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC11.5□□□□□ -0.57
RTL8CO15255 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC11.5□□□□□ -0.57
RTL8CO15255 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
RTL8CO15255 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC11.5□□□□□ -0.57
RTL8CO15255 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
RTL8CO15255 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
RTL8CO15255 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC11.5□□□□□ -0.57
RTL8CO15255 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
RTL8CO15255 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
RTL8CO15255 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
RTL8CO15255 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
RTL8CO15255 COPE-202ENST00000349893 948 ntTSL 2 BASIC11.5□□□□□ -0.57
RTL8CO15255 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
RTL8CO15255 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
RTL8CO15255 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC11.5□□□□□ -0.57
RTL8CO15255 AL513480.1-201ENST00000451731 511 ntBASIC11.5□□□□□ -0.57
RTL8CO15255 INGX-202ENST00000489074 768 ntBASIC11.5□□□□□ -0.57
RTL8CO15255 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC11.5□□□□□ -0.57
RTL8CO15255 GATB-205ENST00000508611 605 ntTSL 2 BASIC11.5□□□□□ -0.57
RTL8CO15255 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
RTL8CO15255 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
RTL8CO15255 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
RTL8CO15255 PUDP-206ENST00000540122 825 ntTSL 2 BASIC11.5□□□□□ -0.57
RTL8CO15255 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
RTL8CO15255 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
RTL8CO15255 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
RTL8CO15255 ACTL9-202ENST00000612068 1252 ntBASIC11.5□□□□□ -0.57
RTL8CO15255 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC11.5□□□□□ -0.57
RTL8CO15255 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC11.5□□□□□ -0.57
RTL8CO15255 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC11.5□□□□□ -0.57
RTL8CO15255 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC11.5□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 11.3 ms