Protein–RNA interactions for Protein: O14917

PCDH17, Protocadherin-17, humanhuman

Predictions only

Length 1,159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17O14917 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC16.59■□□□□ 0.25
PCDH17O14917 FAM197Y8-203ENST00000450145 560 ntBASIC16.59■□□□□ 0.25
PCDH17O14917 FGFR3P6-201ENST00000457012 610 ntBASIC16.59■□□□□ 0.25
PCDH17O14917 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC16.59■□□□□ 0.25
PCDH17O14917 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC16.59■□□□□ 0.25
PCDH17O14917 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PCDH17O14917 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC16.59■□□□□ 0.25
PCDH17O14917 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCDH17O14917 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCDH17O14917 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC16.59■□□□□ 0.25
PCDH17O14917 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
PCDH17O14917 MED29-202ENST00000594368 1471 ntTSL 2 BASIC16.59■□□□□ 0.25
PCDH17O14917 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PCDH17O14917 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
PCDH17O14917 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCDH17O14917 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
PCDH17O14917 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC16.59■□□□□ 0.25
PCDH17O14917 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC16.59■□□□□ 0.25
PCDH17O14917 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC16.59■□□□□ 0.25
PCDH17O14917 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
PCDH17O14917 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
PCDH17O14917 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC16.58■□□□□ 0.25
PCDH17O14917 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.25
PCDH17O14917 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
PCDH17O14917 BOC-212ENST00000485230 2173 ntTSL 2 BASIC16.58■□□□□ 0.25
PCDH17O14917 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC16.58■□□□□ 0.25
PCDH17O14917 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC16.58■□□□□ 0.25
PCDH17O14917 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PCDH17O14917 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
PCDH17O14917 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PCDH17O14917 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
PCDH17O14917 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PCDH17O14917 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC16.58■□□□□ 0.24
PCDH17O14917 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PCDH17O14917 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC16.58■□□□□ 0.24
PCDH17O14917 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC16.58■□□□□ 0.24
PCDH17O14917 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PCDH17O14917 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PCDH17O14917 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC16.58■□□□□ 0.24
PCDH17O14917 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC16.58■□□□□ 0.24
PCDH17O14917 AC079776.4-201ENST00000511039 504 ntBASIC16.58■□□□□ 0.24
PCDH17O14917 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
PCDH17O14917 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC16.58■□□□□ 0.24
PCDH17O14917 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
PCDH17O14917 AP001269.4-201ENST00000609611 512 ntBASIC16.58■□□□□ 0.24
PCDH17O14917 AP000867.4-201ENST00000641616 219 ntBASIC16.58■□□□□ 0.24
PCDH17O14917 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PCDH17O14917 KRT8P47-201ENST00000604727 1398 ntBASIC16.58■□□□□ 0.24
PCDH17O14917 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
PCDH17O14917 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC16.58■□□□□ 0.24
PCDH17O14917 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
PCDH17O14917 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PCDH17O14917 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
PCDH17O14917 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
PCDH17O14917 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PCDH17O14917 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PCDH17O14917 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC16.58■□□□□ 0.24
PCDH17O14917 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PCDH17O14917 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
PCDH17O14917 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC16.58■□□□□ 0.24
PCDH17O14917 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
PCDH17O14917 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
PCDH17O14917 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
PCDH17O14917 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PCDH17O14917 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC16.58■□□□□ 0.24
PCDH17O14917 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
PCDH17O14917 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
PCDH17O14917 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC16.57■□□□□ 0.24
PCDH17O14917 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PCDH17O14917 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PCDH17O14917 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
PCDH17O14917 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PCDH17O14917 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PCDH17O14917 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC16.57■□□□□ 0.24
PCDH17O14917 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PCDH17O14917 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PCDH17O14917 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PCDH17O14917 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC16.57■□□□□ 0.24
PCDH17O14917 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PCDH17O14917 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PCDH17O14917 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PCDH17O14917 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PCDH17O14917 TLE1-202ENST00000376484 666 ntTSL 3 BASIC16.57■□□□□ 0.24
PCDH17O14917 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PCDH17O14917 PON3-205ENST00000451904 1053 ntTSL 3 BASIC16.57■□□□□ 0.24
PCDH17O14917 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC16.57■□□□□ 0.24
PCDH17O14917 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
PCDH17O14917 AP001005.1-201ENST00000571755 1248 ntBASIC16.57■□□□□ 0.24
PCDH17O14917 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC16.57■□□□□ 0.24
PCDH17O14917 GPALPP1-207ENST00000611650 899 ntBASIC16.57■□□□□ 0.24
PCDH17O14917 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC16.57■□□□□ 0.24
PCDH17O14917 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PCDH17O14917 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC16.57■□□□□ 0.24
PCDH17O14917 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PCDH17O14917 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC16.57■□□□□ 0.24
PCDH17O14917 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC16.57■□□□□ 0.24
PCDH17O14917 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PCDH17O14917 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
PCDH17O14917 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PCDH17O14917 AL356309.3-201ENST00000624132 1934 ntBASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms