Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC27.59■■■□□ 2.01
CHD1O14646 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC27.59■■■□□ 2.01
CHD1O14646 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC27.59■■■□□ 2.01
CHD1O14646 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC27.59■■■□□ 2.01
CHD1O14646 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC27.59■■■□□ 2.01
CHD1O14646 AL035456.1-201ENST00000456064 1369 ntBASIC27.59■■■□□ 2.01
CHD1O14646 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC27.58■■■□□ 2.01
CHD1O14646 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC27.58■■■□□ 2.01
CHD1O14646 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC27.58■■■□□ 2.01
CHD1O14646 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC27.58■■■□□ 2.01
CHD1O14646 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC27.58■■■□□ 2.01
CHD1O14646 CD74-212ENST00000524315 584 ntTSL 5 BASIC27.58■■■□□ 2.01
CHD1O14646 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC27.58■■■□□ 2.01
CHD1O14646 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC27.58■■■□□ 2.01
CHD1O14646 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC27.58■■■□□ 2.01
CHD1O14646 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
CHD1O14646 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC27.58■■■□□ 2.01
CHD1O14646 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC27.58■■■□□ 2.01
CHD1O14646 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC27.58■■■□□ 2.01
CHD1O14646 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC27.58■■■□□ 2.01
CHD1O14646 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC27.58■■■□□ 2.01
CHD1O14646 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC27.58■■■□□ 2.01
CHD1O14646 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC27.58■■■□□ 2.01
CHD1O14646 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC27.58■■■□□ 2.01
CHD1O14646 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
CHD1O14646 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC27.58■■■□□ 2.01
CHD1O14646 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC27.58■■■□□ 2.01
CHD1O14646 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC27.58■■■□□ 2.01
CHD1O14646 MIR1908-201ENST00000410394 80 ntBASIC27.58■■■□□ 2.01
CHD1O14646 AC087499.6-201ENST00000411576 835 ntBASIC27.58■■■□□ 2.01
CHD1O14646 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC27.58■■■□□ 2.01
CHD1O14646 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC27.58■■■□□ 2.01
CHD1O14646 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC27.58■■■□□ 2.01
CHD1O14646 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC27.58■■■□□ 2.01
CHD1O14646 REXO1L11P-201ENST00000620964 1927 ntBASIC27.58■■■□□ 2.01
CHD1O14646 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC27.58■■■□□ 2
CHD1O14646 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC27.58■■■□□ 2
CHD1O14646 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
CHD1O14646 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC27.57■■■□□ 2
CHD1O14646 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC27.57■■■□□ 2
CHD1O14646 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC27.57■■■□□ 2
CHD1O14646 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC27.57■■■□□ 2
CHD1O14646 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC27.57■■■□□ 2
CHD1O14646 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC27.57■■■□□ 2
CHD1O14646 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC27.57■■■□□ 2
CHD1O14646 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
CHD1O14646 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC27.57■■■□□ 2
CHD1O14646 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC27.57■■■□□ 2
CHD1O14646 AL355994.2-201ENST00000447882 704 ntBASIC27.57■■■□□ 2
CHD1O14646 CROCCP4-201ENST00000457096 498 ntBASIC27.57■■■□□ 2
CHD1O14646 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC27.57■■■□□ 2
CHD1O14646 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC27.57■■■□□ 2
CHD1O14646 AC073592.3-201ENST00000625118 1834 ntBASIC27.57■■■□□ 2
CHD1O14646 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC27.57■■■□□ 2
CHD1O14646 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC27.57■■■□□ 2
CHD1O14646 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
CHD1O14646 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
CHD1O14646 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC27.57■■■□□ 2
CHD1O14646 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC27.57■■■□□ 2
CHD1O14646 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC27.57■■■□□ 2
CHD1O14646 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC27.57■■■□□ 2
CHD1O14646 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
CHD1O14646 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC27.56■■■□□ 2
CHD1O14646 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC27.56■■■□□ 2
CHD1O14646 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC27.56■■■□□ 2
CHD1O14646 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC27.56■■■□□ 2
CHD1O14646 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC27.56■■■□□ 2
CHD1O14646 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC27.56■■■□□ 2
CHD1O14646 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC27.56■■■□□ 2
CHD1O14646 LITAF-210ENST00000571976 548 ntTSL 2 BASIC27.56■■■□□ 2
CHD1O14646 LITAF-214ENST00000574703 486 ntTSL 2 BASIC27.56■■■□□ 2
CHD1O14646 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC27.56■■■□□ 2
CHD1O14646 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC27.56■■■□□ 2
CHD1O14646 TECR-220ENST00000600083 1204 ntTSL 2 BASIC27.56■■■□□ 2
CHD1O14646 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC27.56■■■□□ 2
CHD1O14646 AL031598.1-201ENST00000561511 1773 ntBASIC27.56■■■□□ 2
CHD1O14646 AC005332.7-201ENST00000614046 2005 ntBASIC27.56■■■□□ 2
CHD1O14646 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC27.56■■■□□ 2
CHD1O14646 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC27.56■■■□□ 2
CHD1O14646 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
CHD1O14646 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC27.56■■■□□ 2
CHD1O14646 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC27.56■■■□□ 2
CHD1O14646 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC27.56■■■□□ 2
CHD1O14646 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC27.56■■■□□ 2
CHD1O14646 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC27.55■■■□□ 2
CHD1O14646 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC27.55■■■□□ 2
CHD1O14646 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC27.55■■■□□ 2
CHD1O14646 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC27.55■■■□□ 2
CHD1O14646 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC27.55■■■□□ 2
CHD1O14646 ELK1P1-201ENST00000485699 580 ntBASIC27.55■■■□□ 2
CHD1O14646 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
CHD1O14646 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC27.55■■■□□ 2
CHD1O14646 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
CHD1O14646 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
CHD1O14646 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC27.55■■■□□ 2
CHD1O14646 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC27.55■■■□□ 2
CHD1O14646 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
CHD1O14646 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC27.55■■■□□ 2
CHD1O14646 OSM-203ENST00000403463 464 ntTSL 3 BASIC27.55■■■□□ 2
CHD1O14646 AC098850.1-201ENST00000419919 790 ntBASIC27.55■■■□□ 2
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms