Protein–RNA interactions for Protein: O00221

NFKBIE, NF-kappa-B inhibitor epsilon, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKBIEO00221 MTRF1LP2-201ENST00000506027 1122 ntBASIC20.67■□□□□ 0.9
NFKBIEO00221 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
NFKBIEO00221 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
NFKBIEO00221 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC20.67■□□□□ 0.9
NFKBIEO00221 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
NFKBIEO00221 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC20.67■□□□□ 0.9
NFKBIEO00221 ARL16-202ENST00000570561 768 ntTSL 2 BASIC20.67■□□□□ 0.9
NFKBIEO00221 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC20.67■□□□□ 0.9
NFKBIEO00221 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NFKBIEO00221 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
NFKBIEO00221 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC20.67■□□□□ 0.9
NFKBIEO00221 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC20.67■□□□□ 0.9
NFKBIEO00221 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC20.67■□□□□ 0.9
NFKBIEO00221 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC20.67■□□□□ 0.9
NFKBIEO00221 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NFKBIEO00221 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC20.67■□□□□ 0.9
NFKBIEO00221 GRAMD4P3-201ENST00000621665 1669 ntBASIC20.67■□□□□ 0.9
NFKBIEO00221 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NFKBIEO00221 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
NFKBIEO00221 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC20.67■□□□□ 0.9
NFKBIEO00221 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
NFKBIEO00221 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
NFKBIEO00221 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NFKBIEO00221 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
NFKBIEO00221 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NFKBIEO00221 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NFKBIEO00221 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
NFKBIEO00221 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NFKBIEO00221 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NFKBIEO00221 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
NFKBIEO00221 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC20.66■□□□□ 0.9
NFKBIEO00221 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC20.66■□□□□ 0.9
NFKBIEO00221 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC20.66■□□□□ 0.9
NFKBIEO00221 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
NFKBIEO00221 AC017083.2-201ENST00000608069 979 ntBASIC20.66■□□□□ 0.9
NFKBIEO00221 AC003101.2-201ENST00000612557 442 ntBASIC20.66■□□□□ 0.9
NFKBIEO00221 AL353732.1-201ENST00000569618 1459 ntBASIC20.66■□□□□ 0.9
NFKBIEO00221 AP3S2-216ENST00000617003 1561 ntBASIC20.66■□□□□ 0.9
NFKBIEO00221 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC20.66■□□□□ 0.9
NFKBIEO00221 NARF-206ENST00000457415 1668 ntTSL 5 BASIC20.66■□□□□ 0.9
NFKBIEO00221 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
NFKBIEO00221 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
NFKBIEO00221 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NFKBIEO00221 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NFKBIEO00221 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC20.66■□□□□ 0.9
NFKBIEO00221 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
NFKBIEO00221 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
NFKBIEO00221 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
NFKBIEO00221 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC20.66■□□□□ 0.9
NFKBIEO00221 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
NFKBIEO00221 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC20.66■□□□□ 0.9
NFKBIEO00221 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
NFKBIEO00221 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
NFKBIEO00221 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC20.65■□□□□ 0.9
NFKBIEO00221 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
NFKBIEO00221 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
NFKBIEO00221 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
NFKBIEO00221 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
NFKBIEO00221 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NFKBIEO00221 KRT18P55-202ENST00000578578 1546 ntBASIC20.65■□□□□ 0.9
NFKBIEO00221 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
NFKBIEO00221 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
NFKBIEO00221 AC098614.1-201ENST00000368528 745 ntBASIC20.65■□□□□ 0.9
NFKBIEO00221 DGCR5-201ENST00000399539 862 ntBASIC20.65■□□□□ 0.9
NFKBIEO00221 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
NFKBIEO00221 ACA64.2-201ENST00000459014 129 ntBASIC20.65■□□□□ 0.9
NFKBIEO00221 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC20.65■□□□□ 0.9
NFKBIEO00221 STOM-203ENST00000538954 1257 ntTSL 5 BASIC20.65■□□□□ 0.9
NFKBIEO00221 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC20.65■□□□□ 0.9
NFKBIEO00221 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
NFKBIEO00221 AL844908.2-201ENST00000609461 460 ntBASIC20.65■□□□□ 0.9
NFKBIEO00221 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
NFKBIEO00221 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
NFKBIEO00221 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NFKBIEO00221 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NFKBIEO00221 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC20.65■□□□□ 0.9
NFKBIEO00221 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC20.64■□□□□ 0.9
NFKBIEO00221 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC20.64■□□□□ 0.9
NFKBIEO00221 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC20.64■□□□□ 0.9
NFKBIEO00221 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC20.64■□□□□ 0.89
NFKBIEO00221 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC20.64■□□□□ 0.89
NFKBIEO00221 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC20.64■□□□□ 0.89
NFKBIEO00221 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
NFKBIEO00221 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.89
NFKBIEO00221 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC20.64■□□□□ 0.89
NFKBIEO00221 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
NFKBIEO00221 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC20.64■□□□□ 0.89
NFKBIEO00221 AL353779.1-201ENST00000434793 351 ntBASIC20.64■□□□□ 0.89
NFKBIEO00221 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
NFKBIEO00221 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC20.64■□□□□ 0.89
NFKBIEO00221 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC20.64■□□□□ 0.89
NFKBIEO00221 MIR3909-201ENST00000579518 119 ntBASIC20.64■□□□□ 0.89
NFKBIEO00221 AL162274.1-201ENST00000617191 1098 ntBASIC20.64■□□□□ 0.89
NFKBIEO00221 AC004840.1-201ENST00000636359 365 ntBASIC20.64■□□□□ 0.89
NFKBIEO00221 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC20.64■□□□□ 0.89
NFKBIEO00221 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
NFKBIEO00221 STK4-201ENST00000372801 2038 ntTSL 2 BASIC20.64■□□□□ 0.89
NFKBIEO00221 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
NFKBIEO00221 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC20.64■□□□□ 0.89
NFKBIEO00221 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms