Protein–RNA interactions for Protein: O00203

AP3B1, AP-3 complex subunit beta-1, humanhuman

Predictions only

Length 1,094 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1O00203 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
AP3B1O00203 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
AP3B1O00203 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
AP3B1O00203 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC17.52■□□□□ 0.4
AP3B1O00203 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC17.52■□□□□ 0.4
AP3B1O00203 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
AP3B1O00203 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
AP3B1O00203 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
AP3B1O00203 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC17.52■□□□□ 0.4
AP3B1O00203 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
AP3B1O00203 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
AP3B1O00203 TOB2P1-201ENST00000469761 992 ntBASIC17.52■□□□□ 0.4
AP3B1O00203 AC091607.1-201ENST00000490318 1060 ntBASIC17.52■□□□□ 0.4
AP3B1O00203 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
AP3B1O00203 AP002414.4-201ENST00000589764 1148 ntBASIC17.52■□□□□ 0.4
AP3B1O00203 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC17.52■□□□□ 0.4
AP3B1O00203 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC17.52■□□□□ 0.4
AP3B1O00203 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
AP3B1O00203 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
AP3B1O00203 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
AP3B1O00203 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC17.52■□□□□ 0.4
AP3B1O00203 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
AP3B1O00203 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
AP3B1O00203 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
AP3B1O00203 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
AP3B1O00203 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
AP3B1O00203 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
AP3B1O00203 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC17.52■□□□□ 0.39
AP3B1O00203 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC17.52■□□□□ 0.39
AP3B1O00203 NSUN5P1-202ENST00000421140 1535 ntBASIC17.52■□□□□ 0.39
AP3B1O00203 NSUN5P2-203ENST00000457352 1529 ntBASIC17.52■□□□□ 0.39
AP3B1O00203 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC17.52■□□□□ 0.39
AP3B1O00203 AC132938.5-201ENST00000624980 1813 ntBASIC17.51■□□□□ 0.39
AP3B1O00203 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
AP3B1O00203 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
AP3B1O00203 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
AP3B1O00203 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
AP3B1O00203 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC17.51■□□□□ 0.39
AP3B1O00203 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
AP3B1O00203 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
AP3B1O00203 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
AP3B1O00203 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
AP3B1O00203 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
AP3B1O00203 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
AP3B1O00203 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
AP3B1O00203 AP002383.4-201ENST00000442518 975 ntBASIC17.51■□□□□ 0.39
AP3B1O00203 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC17.51■□□□□ 0.39
AP3B1O00203 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC17.51■□□□□ 0.39
AP3B1O00203 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC17.51■□□□□ 0.39
AP3B1O00203 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
AP3B1O00203 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
AP3B1O00203 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC17.51■□□□□ 0.39
AP3B1O00203 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC17.51■□□□□ 0.39
AP3B1O00203 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
AP3B1O00203 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
AP3B1O00203 AC092329.2-201ENST00000598402 547 ntBASIC17.51■□□□□ 0.39
AP3B1O00203 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
AP3B1O00203 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC17.51■□□□□ 0.39
AP3B1O00203 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
AP3B1O00203 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC17.51■□□□□ 0.39
AP3B1O00203 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
AP3B1O00203 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
AP3B1O00203 AC022211.2-201ENST00000585075 2527 ntBASIC17.51■□□□□ 0.39
AP3B1O00203 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC17.51■□□□□ 0.39
AP3B1O00203 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
AP3B1O00203 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
AP3B1O00203 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
AP3B1O00203 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
AP3B1O00203 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC17.5■□□□□ 0.39
AP3B1O00203 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
AP3B1O00203 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
AP3B1O00203 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC17.5■□□□□ 0.39
AP3B1O00203 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
AP3B1O00203 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
AP3B1O00203 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC17.5■□□□□ 0.39
AP3B1O00203 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
AP3B1O00203 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC17.5■□□□□ 0.39
AP3B1O00203 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
AP3B1O00203 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
AP3B1O00203 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
AP3B1O00203 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
AP3B1O00203 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
AP3B1O00203 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
AP3B1O00203 IGHV3-47-201ENST00000425060 335 ntBASIC17.5■□□□□ 0.39
AP3B1O00203 LINC00265-3P-201ENST00000447588 903 ntBASIC17.5■□□□□ 0.39
AP3B1O00203 SIGLEC30P-201ENST00000455569 941 ntBASIC17.5■□□□□ 0.39
AP3B1O00203 AC104819.1-201ENST00000504587 486 ntBASIC17.5■□□□□ 0.39
AP3B1O00203 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
AP3B1O00203 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC17.5■□□□□ 0.39
AP3B1O00203 AC114341.1-201ENST00000618070 349 ntBASIC17.5■□□□□ 0.39
AP3B1O00203 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC17.5■□□□□ 0.39
AP3B1O00203 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC17.5■□□□□ 0.39
AP3B1O00203 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC17.5■□□□□ 0.39
AP3B1O00203 AC011270.2-201ENST00000624293 2550 ntBASIC17.5■□□□□ 0.39
AP3B1O00203 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
AP3B1O00203 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
AP3B1O00203 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
AP3B1O00203 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
AP3B1O00203 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
AP3B1O00203 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms