Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRIM49D1C9J1S8 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRIM49D1C9J1S8 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRIM49D1C9J1S8 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC17.4■□□□□ 0.38
TRIM49D1C9J1S8 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TRIM49D1C9J1S8 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC17.4■□□□□ 0.38
TRIM49D1C9J1S8 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TRIM49D1C9J1S8 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRIM49D1C9J1S8 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
TRIM49D1C9J1S8 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRIM49D1C9J1S8 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
TRIM49D1C9J1S8 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.38
TRIM49D1C9J1S8 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
TRIM49D1C9J1S8 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
TRIM49D1C9J1S8 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC17.39■□□□□ 0.38
TRIM49D1C9J1S8 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TRIM49D1C9J1S8 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRIM49D1C9J1S8 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRIM49D1C9J1S8 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC17.39■□□□□ 0.37
TRIM49D1C9J1S8 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRIM49D1C9J1S8 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TRIM49D1C9J1S8 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRIM49D1C9J1S8 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TRIM49D1C9J1S8 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRIM49D1C9J1S8 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC17.39■□□□□ 0.37
TRIM49D1C9J1S8 AL359075.1-203ENST00000462729 1002 ntBASIC17.39■□□□□ 0.37
TRIM49D1C9J1S8 IGHV3-52-201ENST00000519770 353 ntBASIC17.39■□□□□ 0.37
TRIM49D1C9J1S8 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC17.39■□□□□ 0.37
TRIM49D1C9J1S8 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC17.39■□□□□ 0.37
TRIM49D1C9J1S8 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC17.39■□□□□ 0.37
TRIM49D1C9J1S8 AC139887.4-201ENST00000607877 719 ntBASIC17.39■□□□□ 0.37
TRIM49D1C9J1S8 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRIM49D1C9J1S8 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC17.39■□□□□ 0.37
TRIM49D1C9J1S8 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC17.39■□□□□ 0.37
TRIM49D1C9J1S8 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TRIM49D1C9J1S8 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRIM49D1C9J1S8 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRIM49D1C9J1S8 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC17.39■□□□□ 0.37
TRIM49D1C9J1S8 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
TRIM49D1C9J1S8 WT1-209ENST00000530998 2421 ntTSL 2 BASIC17.39■□□□□ 0.37
TRIM49D1C9J1S8 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
TRIM49D1C9J1S8 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TRIM49D1C9J1S8 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRIM49D1C9J1S8 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
TRIM49D1C9J1S8 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC17.39■□□□□ 0.37
TRIM49D1C9J1S8 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRIM49D1C9J1S8 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC17.38■□□□□ 0.37
TRIM49D1C9J1S8 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRIM49D1C9J1S8 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC17.38■□□□□ 0.37
TRIM49D1C9J1S8 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC17.38■□□□□ 0.37
TRIM49D1C9J1S8 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRIM49D1C9J1S8 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC17.38■□□□□ 0.37
TRIM49D1C9J1S8 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
TRIM49D1C9J1S8 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC17.38■□□□□ 0.37
TRIM49D1C9J1S8 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRIM49D1C9J1S8 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRIM49D1C9J1S8 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC17.38■□□□□ 0.37
TRIM49D1C9J1S8 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC17.38■□□□□ 0.37
TRIM49D1C9J1S8 SAPCD2P2-201ENST00000431719 1174 ntBASIC17.38■□□□□ 0.37
TRIM49D1C9J1S8 YBX1P2-201ENST00000489612 999 ntBASIC17.38■□□□□ 0.37
TRIM49D1C9J1S8 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TRIM49D1C9J1S8 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
TRIM49D1C9J1S8 AL390719.2-201ENST00000606993 987 ntBASIC17.38■□□□□ 0.37
TRIM49D1C9J1S8 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC17.38■□□□□ 0.37
TRIM49D1C9J1S8 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC17.38■□□□□ 0.37
TRIM49D1C9J1S8 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRIM49D1C9J1S8 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC17.38■□□□□ 0.37
TRIM49D1C9J1S8 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRIM49D1C9J1S8 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC17.38■□□□□ 0.37
TRIM49D1C9J1S8 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
TRIM49D1C9J1S8 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRIM49D1C9J1S8 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRIM49D1C9J1S8 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC17.38■□□□□ 0.37
TRIM49D1C9J1S8 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC17.38■□□□□ 0.37
TRIM49D1C9J1S8 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC17.38■□□□□ 0.37
TRIM49D1C9J1S8 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC17.38■□□□□ 0.37
TRIM49D1C9J1S8 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC17.38■□□□□ 0.37
TRIM49D1C9J1S8 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
TRIM49D1C9J1S8 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC17.38■□□□□ 0.37
TRIM49D1C9J1S8 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC17.38■□□□□ 0.37
TRIM49D1C9J1S8 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC17.38■□□□□ 0.37
TRIM49D1C9J1S8 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC17.38■□□□□ 0.37
TRIM49D1C9J1S8 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRIM49D1C9J1S8 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC17.37■□□□□ 0.37
TRIM49D1C9J1S8 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRIM49D1C9J1S8 LGALS8-AS1-201ENST00000487567 1457 ntBASIC17.37■□□□□ 0.37
TRIM49D1C9J1S8 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TRIM49D1C9J1S8 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRIM49D1C9J1S8 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC17.37■□□□□ 0.37
TRIM49D1C9J1S8 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRIM49D1C9J1S8 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TRIM49D1C9J1S8 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TRIM49D1C9J1S8 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRIM49D1C9J1S8 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRIM49D1C9J1S8 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TRIM49D1C9J1S8 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC17.37■□□□□ 0.37
TRIM49D1C9J1S8 HBZP1-201ENST00000354915 429 ntBASIC17.37■□□□□ 0.37
TRIM49D1C9J1S8 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
TRIM49D1C9J1S8 AL596275.1-201ENST00000423464 877 ntBASIC17.37■□□□□ 0.37
TRIM49D1C9J1S8 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms