Protein–RNA interactions for Protein: B2RNN3

C1QTNF9B, Complement C1q and tumor necrosis factor-related protein 9B, humanhuman

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C1QTNF9BB2RNN3 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
C1QTNF9BB2RNN3 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
C1QTNF9BB2RNN3 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
C1QTNF9BB2RNN3 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
C1QTNF9BB2RNN3 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
C1QTNF9BB2RNN3 RPF1-202ENST00000370656 724 ntTSL 2 BASIC16.16■□□□□ 0.18
C1QTNF9BB2RNN3 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
C1QTNF9BB2RNN3 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
C1QTNF9BB2RNN3 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
C1QTNF9BB2RNN3 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC16.16■□□□□ 0.18
C1QTNF9BB2RNN3 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC16.16■□□□□ 0.18
C1QTNF9BB2RNN3 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC16.16■□□□□ 0.18
C1QTNF9BB2RNN3 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC16.16■□□□□ 0.18
C1QTNF9BB2RNN3 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC16.16■□□□□ 0.18
C1QTNF9BB2RNN3 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC16.16■□□□□ 0.18
C1QTNF9BB2RNN3 AC104794.3-201ENST00000566840 1248 ntBASIC16.16■□□□□ 0.18
C1QTNF9BB2RNN3 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
C1QTNF9BB2RNN3 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC16.16■□□□□ 0.18
C1QTNF9BB2RNN3 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC16.16■□□□□ 0.18
C1QTNF9BB2RNN3 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
C1QTNF9BB2RNN3 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC16.16■□□□□ 0.18
C1QTNF9BB2RNN3 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC16.16■□□□□ 0.18
C1QTNF9BB2RNN3 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
C1QTNF9BB2RNN3 AC093677.2-201ENST00000600169 1863 ntBASIC16.16■□□□□ 0.18
C1QTNF9BB2RNN3 AC129492.6-201ENST00000611383 1305 ntBASIC16.16■□□□□ 0.18
C1QTNF9BB2RNN3 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
C1QTNF9BB2RNN3 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
C1QTNF9BB2RNN3 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
C1QTNF9BB2RNN3 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
C1QTNF9BB2RNN3 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
C1QTNF9BB2RNN3 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
C1QTNF9BB2RNN3 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC16.15■□□□□ 0.18
C1QTNF9BB2RNN3 AP000974.1-201ENST00000623909 2387 ntBASIC16.15■□□□□ 0.18
C1QTNF9BB2RNN3 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC16.15■□□□□ 0.18
C1QTNF9BB2RNN3 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC16.15■□□□□ 0.18
C1QTNF9BB2RNN3 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
C1QTNF9BB2RNN3 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
C1QTNF9BB2RNN3 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
C1QTNF9BB2RNN3 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
C1QTNF9BB2RNN3 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC16.15■□□□□ 0.18
C1QTNF9BB2RNN3 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
C1QTNF9BB2RNN3 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
C1QTNF9BB2RNN3 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC16.15■□□□□ 0.18
C1QTNF9BB2RNN3 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC16.15■□□□□ 0.18
C1QTNF9BB2RNN3 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC16.15■□□□□ 0.18
C1QTNF9BB2RNN3 MIR6787-201ENST00000616675 61 ntBASIC16.15■□□□□ 0.18
C1QTNF9BB2RNN3 SPDYE12P-201ENST00000618416 771 ntBASIC16.15■□□□□ 0.18
C1QTNF9BB2RNN3 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC16.15■□□□□ 0.18
C1QTNF9BB2RNN3 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
C1QTNF9BB2RNN3 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC16.15■□□□□ 0.18
C1QTNF9BB2RNN3 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
C1QTNF9BB2RNN3 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC16.15■□□□□ 0.18
C1QTNF9BB2RNN3 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC16.15■□□□□ 0.18
C1QTNF9BB2RNN3 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC16.15■□□□□ 0.18
C1QTNF9BB2RNN3 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC16.15■□□□□ 0.18
C1QTNF9BB2RNN3 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
C1QTNF9BB2RNN3 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
C1QTNF9BB2RNN3 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
C1QTNF9BB2RNN3 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.18
C1QTNF9BB2RNN3 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
C1QTNF9BB2RNN3 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.18
C1QTNF9BB2RNN3 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
C1QTNF9BB2RNN3 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC16.14■□□□□ 0.17
C1QTNF9BB2RNN3 AL161938.1-201ENST00000569833 2180 ntBASIC16.14■□□□□ 0.17
C1QTNF9BB2RNN3 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
C1QTNF9BB2RNN3 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
C1QTNF9BB2RNN3 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
C1QTNF9BB2RNN3 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
C1QTNF9BB2RNN3 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
C1QTNF9BB2RNN3 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
C1QTNF9BB2RNN3 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
C1QTNF9BB2RNN3 AC138932.1-201ENST00000534164 6830 ntBASIC16.14■□□□□ 0.17
C1QTNF9BB2RNN3 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC16.14■□□□□ 0.17
C1QTNF9BB2RNN3 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
C1QTNF9BB2RNN3 AC092933.1-201ENST00000393644 945 ntBASIC16.14■□□□□ 0.17
C1QTNF9BB2RNN3 MPV17-208ENST00000405076 603 ntTSL 5 BASIC16.14■□□□□ 0.17
C1QTNF9BB2RNN3 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC16.14■□□□□ 0.17
C1QTNF9BB2RNN3 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
C1QTNF9BB2RNN3 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
C1QTNF9BB2RNN3 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
C1QTNF9BB2RNN3 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC16.14■□□□□ 0.17
C1QTNF9BB2RNN3 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
C1QTNF9BB2RNN3 RPL28-206ENST00000558752 671 ntTSL 3 BASIC16.14■□□□□ 0.17
C1QTNF9BB2RNN3 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC16.14■□□□□ 0.17
C1QTNF9BB2RNN3 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
C1QTNF9BB2RNN3 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC16.14■□□□□ 0.17
C1QTNF9BB2RNN3 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC16.14■□□□□ 0.17
C1QTNF9BB2RNN3 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
C1QTNF9BB2RNN3 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
C1QTNF9BB2RNN3 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC16.14■□□□□ 0.17
C1QTNF9BB2RNN3 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
C1QTNF9BB2RNN3 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC16.14■□□□□ 0.17
C1QTNF9BB2RNN3 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC16.14■□□□□ 0.17
C1QTNF9BB2RNN3 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
C1QTNF9BB2RNN3 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC16.14■□□□□ 0.17
C1QTNF9BB2RNN3 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
C1QTNF9BB2RNN3 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
C1QTNF9BB2RNN3 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
C1QTNF9BB2RNN3 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
C1QTNF9BB2RNN3 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms