Protein–RNA interactions for Protein: A2VCL2

CCDC162P, Coiled-coil domain-containing protein 162, humanhuman

Predictions only

Length 907 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC162PA2VCL2 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC162PA2VCL2 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC162PA2VCL2 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
CCDC162PA2VCL2 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
CCDC162PA2VCL2 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC162PA2VCL2 AC093525.9-201ENST00000624961 1746 ntBASIC17.35■□□□□ 0.37
CCDC162PA2VCL2 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
CCDC162PA2VCL2 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC162PA2VCL2 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC17.35■□□□□ 0.37
CCDC162PA2VCL2 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
CCDC162PA2VCL2 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC162PA2VCL2 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC162PA2VCL2 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC162PA2VCL2 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
CCDC162PA2VCL2 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC162PA2VCL2 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC162PA2VCL2 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC17.35■□□□□ 0.37
CCDC162PA2VCL2 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC162PA2VCL2 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC162PA2VCL2 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC162PA2VCL2 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC162PA2VCL2 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC162PA2VCL2 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC162PA2VCL2 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC162PA2VCL2 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
CCDC162PA2VCL2 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC162PA2VCL2 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC17.35■□□□□ 0.37
CCDC162PA2VCL2 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC162PA2VCL2 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC17.35■□□□□ 0.37
CCDC162PA2VCL2 SRP19-202ENST00000445150 833 ntTSL 2 BASIC17.35■□□□□ 0.37
CCDC162PA2VCL2 NUS1P1-201ENST00000446295 882 ntBASIC17.35■□□□□ 0.37
CCDC162PA2VCL2 RBSN-204ENST00000449050 903 ntTSL 2 BASIC17.35■□□□□ 0.37
CCDC162PA2VCL2 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC17.35■□□□□ 0.37
CCDC162PA2VCL2 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC17.35■□□□□ 0.37
CCDC162PA2VCL2 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC17.35■□□□□ 0.37
CCDC162PA2VCL2 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC162PA2VCL2 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
CCDC162PA2VCL2 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC17.35■□□□□ 0.37
CCDC162PA2VCL2 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC162PA2VCL2 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC162PA2VCL2 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC162PA2VCL2 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
CCDC162PA2VCL2 RHBDF1P1-201ENST00000427504 1941 ntBASIC17.35■□□□□ 0.37
CCDC162PA2VCL2 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC17.35■□□□□ 0.37
CCDC162PA2VCL2 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC17.35■□□□□ 0.37
CCDC162PA2VCL2 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC162PA2VCL2 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC17.35■□□□□ 0.37
CCDC162PA2VCL2 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC162PA2VCL2 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC162PA2VCL2 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC17.35■□□□□ 0.37
CCDC162PA2VCL2 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC162PA2VCL2 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC162PA2VCL2 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
CCDC162PA2VCL2 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC162PA2VCL2 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
CCDC162PA2VCL2 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC162PA2VCL2 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC162PA2VCL2 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC17.34■□□□□ 0.37
CCDC162PA2VCL2 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
CCDC162PA2VCL2 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
CCDC162PA2VCL2 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC162PA2VCL2 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC162PA2VCL2 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC162PA2VCL2 SOD2-201ENST00000337404 991 ntTSL 2 BASIC17.34■□□□□ 0.37
CCDC162PA2VCL2 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC162PA2VCL2 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC162PA2VCL2 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC17.34■□□□□ 0.37
CCDC162PA2VCL2 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
CCDC162PA2VCL2 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC162PA2VCL2 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC17.34■□□□□ 0.37
CCDC162PA2VCL2 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC162PA2VCL2 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC17.34■□□□□ 0.37
CCDC162PA2VCL2 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC162PA2VCL2 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC17.34■□□□□ 0.37
CCDC162PA2VCL2 AC132008.2-207ENST00000454517 770 ntBASIC17.34■□□□□ 0.37
CCDC162PA2VCL2 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC17.34■□□□□ 0.37
CCDC162PA2VCL2 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC162PA2VCL2 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC17.34■□□□□ 0.37
CCDC162PA2VCL2 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC17.34■□□□□ 0.37
CCDC162PA2VCL2 METTL23-204ENST00000586752 904 ntTSL 2 BASIC17.34■□□□□ 0.37
CCDC162PA2VCL2 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC162PA2VCL2 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC17.34■□□□□ 0.37
CCDC162PA2VCL2 AC148477.5-201ENST00000625164 1645 ntBASIC17.34■□□□□ 0.37
CCDC162PA2VCL2 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC17.34■□□□□ 0.37
CCDC162PA2VCL2 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC162PA2VCL2 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC162PA2VCL2 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC162PA2VCL2 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CCDC162PA2VCL2 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CCDC162PA2VCL2 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
CCDC162PA2VCL2 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CCDC162PA2VCL2 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
CCDC162PA2VCL2 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CCDC162PA2VCL2 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC17.33■□□□□ 0.37
CCDC162PA2VCL2 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CCDC162PA2VCL2 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC17.33■□□□□ 0.37
CCDC162PA2VCL2 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.37
CCDC162PA2VCL2 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC17.33■□□□□ 0.37
CCDC162PA2VCL2 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC17.33■□□□□ 0.37
CCDC162PA2VCL2 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms