Protein–RNA interactions for Protein: A0A1B0GX56

TRDV1, T-cell receptor delta variable 1 (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRDV1A0A1B0GX56 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC15.27■□□□□ 0.03
TRDV1A0A1B0GX56 BANP-201ENST00000286122 2368 ntTSL 5 BASIC15.27■□□□□ 0.03
TRDV1A0A1B0GX56 ANKRD26P3-201ENST00000454044 2748 ntBASIC15.27■□□□□ 0.03
TRDV1A0A1B0GX56 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TRDV1A0A1B0GX56 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TRDV1A0A1B0GX56 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TRDV1A0A1B0GX56 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
TRDV1A0A1B0GX56 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC15.27■□□□□ 0.03
TRDV1A0A1B0GX56 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.03
TRDV1A0A1B0GX56 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
TRDV1A0A1B0GX56 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC15.27■□□□□ 0.03
TRDV1A0A1B0GX56 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TRDV1A0A1B0GX56 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TRDV1A0A1B0GX56 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC15.27■□□□□ 0.03
TRDV1A0A1B0GX56 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRDV1A0A1B0GX56 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TRDV1A0A1B0GX56 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRDV1A0A1B0GX56 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRDV1A0A1B0GX56 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TRDV1A0A1B0GX56 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRDV1A0A1B0GX56 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRDV1A0A1B0GX56 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC15.26■□□□□ 0.03
TRDV1A0A1B0GX56 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
TRDV1A0A1B0GX56 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC15.26■□□□□ 0.03
TRDV1A0A1B0GX56 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC15.26■□□□□ 0.03
TRDV1A0A1B0GX56 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRDV1A0A1B0GX56 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRDV1A0A1B0GX56 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC15.26■□□□□ 0.03
TRDV1A0A1B0GX56 GAD2-202ENST00000376248 680 ntTSL 5 BASIC15.26■□□□□ 0.03
TRDV1A0A1B0GX56 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC15.26■□□□□ 0.03
TRDV1A0A1B0GX56 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC15.26■□□□□ 0.03
TRDV1A0A1B0GX56 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC15.26■□□□□ 0.03
TRDV1A0A1B0GX56 KRT18P6-201ENST00000555540 1265 ntBASIC15.26■□□□□ 0.03
TRDV1A0A1B0GX56 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC15.26■□□□□ 0.03
TRDV1A0A1B0GX56 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC15.26■□□□□ 0.03
TRDV1A0A1B0GX56 AC024563.2-201ENST00000603282 481 ntBASIC15.26■□□□□ 0.03
TRDV1A0A1B0GX56 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC15.26■□□□□ 0.03
TRDV1A0A1B0GX56 MMD2-204ENST00000612910 778 ntTSL 5 BASIC15.26■□□□□ 0.03
TRDV1A0A1B0GX56 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRDV1A0A1B0GX56 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC15.26■□□□□ 0.03
TRDV1A0A1B0GX56 STX3-203ENST00000529177 1571 ntTSL 2 BASIC15.26■□□□□ 0.03
TRDV1A0A1B0GX56 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
TRDV1A0A1B0GX56 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRDV1A0A1B0GX56 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRDV1A0A1B0GX56 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRDV1A0A1B0GX56 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRDV1A0A1B0GX56 AC092364.2-201ENST00000596710 2692 ntBASIC15.26■□□□□ 0.03
TRDV1A0A1B0GX56 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC15.26■□□□□ 0.03
TRDV1A0A1B0GX56 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC15.26■□□□□ 0.03
TRDV1A0A1B0GX56 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
TRDV1A0A1B0GX56 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TRDV1A0A1B0GX56 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
TRDV1A0A1B0GX56 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
TRDV1A0A1B0GX56 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRDV1A0A1B0GX56 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRDV1A0A1B0GX56 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
TRDV1A0A1B0GX56 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRDV1A0A1B0GX56 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC15.25■□□□□ 0.03
TRDV1A0A1B0GX56 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC15.25■□□□□ 0.03
TRDV1A0A1B0GX56 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
TRDV1A0A1B0GX56 HLA-A-202ENST00000376806 1854 ntBASIC15.25■□□□□ 0.03
TRDV1A0A1B0GX56 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
TRDV1A0A1B0GX56 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRDV1A0A1B0GX56 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC15.25■□□□□ 0.03
TRDV1A0A1B0GX56 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC15.25■□□□□ 0.03
TRDV1A0A1B0GX56 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TRDV1A0A1B0GX56 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC15.25■□□□□ 0.03
TRDV1A0A1B0GX56 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TRDV1A0A1B0GX56 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRDV1A0A1B0GX56 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TRDV1A0A1B0GX56 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRDV1A0A1B0GX56 MYCLP1-201ENST00000372451 1075 ntBASIC15.25■□□□□ 0.03
TRDV1A0A1B0GX56 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRDV1A0A1B0GX56 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC15.25■□□□□ 0.03
TRDV1A0A1B0GX56 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC15.25■□□□□ 0.03
TRDV1A0A1B0GX56 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC15.25■□□□□ 0.03
TRDV1A0A1B0GX56 TK1-205ENST00000590862 642 ntTSL 3 BASIC15.25■□□□□ 0.03
TRDV1A0A1B0GX56 SPIB-206ENST00000596074 847 ntTSL 2 BASIC15.25■□□□□ 0.03
TRDV1A0A1B0GX56 FAM197Y4-202ENST00000622692 608 ntBASIC15.25■□□□□ 0.03
TRDV1A0A1B0GX56 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC15.25■□□□□ 0.03
TRDV1A0A1B0GX56 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRDV1A0A1B0GX56 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRDV1A0A1B0GX56 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRDV1A0A1B0GX56 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRDV1A0A1B0GX56 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
TRDV1A0A1B0GX56 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRDV1A0A1B0GX56 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC15.25■□□□□ 0.03
TRDV1A0A1B0GX56 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TRDV1A0A1B0GX56 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRDV1A0A1B0GX56 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
TRDV1A0A1B0GX56 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRDV1A0A1B0GX56 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRDV1A0A1B0GX56 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC15.25■□□□□ 0.03
TRDV1A0A1B0GX56 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC15.25■□□□□ 0.03
TRDV1A0A1B0GX56 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRDV1A0A1B0GX56 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC15.25■□□□□ 0.03
TRDV1A0A1B0GX56 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TRDV1A0A1B0GX56 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TRDV1A0A1B0GX56 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRDV1A0A1B0GX56 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms