Protein–RNA interactions for Protein: Q9Y5F0

PCDHB13, Protocadherin beta-13, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB13Q9Y5F0 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PCDHB13Q9Y5F0 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC19.21■□□□□ 0.67
PCDHB13Q9Y5F0 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC19.21■□□□□ 0.67
PCDHB13Q9Y5F0 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PCDHB13Q9Y5F0 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
PCDHB13Q9Y5F0 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PCDHB13Q9Y5F0 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC19.2■□□□□ 0.66
PCDHB13Q9Y5F0 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PCDHB13Q9Y5F0 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PCDHB13Q9Y5F0 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC19.2■□□□□ 0.66
PCDHB13Q9Y5F0 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PCDHB13Q9Y5F0 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PCDHB13Q9Y5F0 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC19.2■□□□□ 0.66
PCDHB13Q9Y5F0 SIGLEC16-201ENST00000599858 1437 ntBASIC19.2■□□□□ 0.66
PCDHB13Q9Y5F0 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC19.2■□□□□ 0.66
PCDHB13Q9Y5F0 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PCDHB13Q9Y5F0 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
PCDHB13Q9Y5F0 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
PCDHB13Q9Y5F0 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PCDHB13Q9Y5F0 SPDYE21P-201ENST00000413323 827 ntBASIC19.2■□□□□ 0.66
PCDHB13Q9Y5F0 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
PCDHB13Q9Y5F0 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC19.2■□□□□ 0.66
PCDHB13Q9Y5F0 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC19.2■□□□□ 0.66
PCDHB13Q9Y5F0 AC097110.1-201ENST00000507344 768 ntTSL 2 BASIC19.2■□□□□ 0.66
PCDHB13Q9Y5F0 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC19.2■□□□□ 0.66
PCDHB13Q9Y5F0 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC19.2■□□□□ 0.66
PCDHB13Q9Y5F0 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PCDHB13Q9Y5F0 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC19.2■□□□□ 0.66
PCDHB13Q9Y5F0 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC19.2■□□□□ 0.66
PCDHB13Q9Y5F0 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
PCDHB13Q9Y5F0 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
PCDHB13Q9Y5F0 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
PCDHB13Q9Y5F0 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PCDHB13Q9Y5F0 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PCDHB13Q9Y5F0 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
PCDHB13Q9Y5F0 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PCDHB13Q9Y5F0 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PCDHB13Q9Y5F0 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PCDHB13Q9Y5F0 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC19.2■□□□□ 0.66
PCDHB13Q9Y5F0 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PCDHB13Q9Y5F0 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
PCDHB13Q9Y5F0 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
PCDHB13Q9Y5F0 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
PCDHB13Q9Y5F0 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
PCDHB13Q9Y5F0 AC079776.2-201ENST00000641154 1609 ntBASIC19.19■□□□□ 0.66
PCDHB13Q9Y5F0 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PCDHB13Q9Y5F0 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC19.19■□□□□ 0.66
PCDHB13Q9Y5F0 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PCDHB13Q9Y5F0 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
PCDHB13Q9Y5F0 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC19.19■□□□□ 0.66
PCDHB13Q9Y5F0 SIGLEC30P-201ENST00000455569 941 ntBASIC19.19■□□□□ 0.66
PCDHB13Q9Y5F0 AP002336.2-201ENST00000528607 539 ntTSL 5 BASIC19.19■□□□□ 0.66
PCDHB13Q9Y5F0 AC073592.4-201ENST00000623827 446 ntBASIC19.19■□□□□ 0.66
PCDHB13Q9Y5F0 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC19.19■□□□□ 0.66
PCDHB13Q9Y5F0 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC19.19■□□□□ 0.66
PCDHB13Q9Y5F0 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PCDHB13Q9Y5F0 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
PCDHB13Q9Y5F0 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PCDHB13Q9Y5F0 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PCDHB13Q9Y5F0 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PCDHB13Q9Y5F0 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PCDHB13Q9Y5F0 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PCDHB13Q9Y5F0 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC19.19■□□□□ 0.66
PCDHB13Q9Y5F0 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PCDHB13Q9Y5F0 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PCDHB13Q9Y5F0 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC19.19■□□□□ 0.66
PCDHB13Q9Y5F0 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PCDHB13Q9Y5F0 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
PCDHB13Q9Y5F0 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PCDHB13Q9Y5F0 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PCDHB13Q9Y5F0 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
PCDHB13Q9Y5F0 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCDHB13Q9Y5F0 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
PCDHB13Q9Y5F0 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PCDHB13Q9Y5F0 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC19.18■□□□□ 0.66
PCDHB13Q9Y5F0 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC19.18■□□□□ 0.66
PCDHB13Q9Y5F0 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PCDHB13Q9Y5F0 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCDHB13Q9Y5F0 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCDHB13Q9Y5F0 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCDHB13Q9Y5F0 SSR1P1-201ENST00000407630 814 ntBASIC19.18■□□□□ 0.66
PCDHB13Q9Y5F0 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC19.18■□□□□ 0.66
PCDHB13Q9Y5F0 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC19.18■□□□□ 0.66
PCDHB13Q9Y5F0 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC19.18■□□□□ 0.66
PCDHB13Q9Y5F0 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC19.18■□□□□ 0.66
PCDHB13Q9Y5F0 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
PCDHB13Q9Y5F0 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC19.18■□□□□ 0.66
PCDHB13Q9Y5F0 RN7SL121P-201ENST00000584223 273 ntBASIC19.18■□□□□ 0.66
PCDHB13Q9Y5F0 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC19.18■□□□□ 0.66
PCDHB13Q9Y5F0 AL136370.1-201ENST00000608166 691 ntBASIC19.18■□□□□ 0.66
PCDHB13Q9Y5F0 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
PCDHB13Q9Y5F0 REXO1L6P-202ENST00000619970 1078 ntBASIC19.18■□□□□ 0.66
PCDHB13Q9Y5F0 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCDHB13Q9Y5F0 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
PCDHB13Q9Y5F0 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PCDHB13Q9Y5F0 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC19.18■□□□□ 0.66
PCDHB13Q9Y5F0 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCDHB13Q9Y5F0 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCDHB13Q9Y5F0 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
PCDHB13Q9Y5F0 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms