Protein–RNA interactions for Protein: Q9Y2J0

RPH3A, Rabphilin-3A, humanhuman

Predicted RBP Predictions only

Length 694 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AQ9Y2J0 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
RPH3AQ9Y2J0 AP005117.1-201ENST00000584346 1413 ntBASIC15.95■□□□□ 0.14
RPH3AQ9Y2J0 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RPH3AQ9Y2J0 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
RPH3AQ9Y2J0 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
RPH3AQ9Y2J0 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RPH3AQ9Y2J0 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RPH3AQ9Y2J0 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RPH3AQ9Y2J0 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RPH3AQ9Y2J0 KRT18P13-201ENST00000400056 1290 ntBASIC15.95■□□□□ 0.14
RPH3AQ9Y2J0 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC15.95■□□□□ 0.14
RPH3AQ9Y2J0 SRP19-202ENST00000445150 833 ntTSL 2 BASIC15.95■□□□□ 0.14
RPH3AQ9Y2J0 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC15.95■□□□□ 0.14
RPH3AQ9Y2J0 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC15.95■□□□□ 0.14
RPH3AQ9Y2J0 AC079776.4-201ENST00000511039 504 ntBASIC15.95■□□□□ 0.14
RPH3AQ9Y2J0 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC15.95■□□□□ 0.14
RPH3AQ9Y2J0 AP002469.2-201ENST00000531724 424 ntBASIC15.95■□□□□ 0.14
RPH3AQ9Y2J0 AL662844.1-201ENST00000546340 181 ntBASIC15.95■□□□□ 0.14
RPH3AQ9Y2J0 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
RPH3AQ9Y2J0 AL121912.1-201ENST00000603683 238 ntBASIC15.95■□□□□ 0.14
RPH3AQ9Y2J0 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC15.95■□□□□ 0.14
RPH3AQ9Y2J0 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
RPH3AQ9Y2J0 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC15.95■□□□□ 0.14
RPH3AQ9Y2J0 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC15.95■□□□□ 0.14
RPH3AQ9Y2J0 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
RPH3AQ9Y2J0 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
RPH3AQ9Y2J0 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC15.95■□□□□ 0.14
RPH3AQ9Y2J0 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
RPH3AQ9Y2J0 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RPH3AQ9Y2J0 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC15.94■□□□□ 0.14
RPH3AQ9Y2J0 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC15.94■□□□□ 0.14
RPH3AQ9Y2J0 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
RPH3AQ9Y2J0 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
RPH3AQ9Y2J0 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC15.94■□□□□ 0.14
RPH3AQ9Y2J0 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
RPH3AQ9Y2J0 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
RPH3AQ9Y2J0 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC15.94■□□□□ 0.14
RPH3AQ9Y2J0 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
RPH3AQ9Y2J0 REXO1L11P-201ENST00000620964 1927 ntBASIC15.94■□□□□ 0.14
RPH3AQ9Y2J0 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC15.94■□□□□ 0.14
RPH3AQ9Y2J0 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
RPH3AQ9Y2J0 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC15.94■□□□□ 0.14
RPH3AQ9Y2J0 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
RPH3AQ9Y2J0 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC15.94■□□□□ 0.14
RPH3AQ9Y2J0 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
RPH3AQ9Y2J0 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
RPH3AQ9Y2J0 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
RPH3AQ9Y2J0 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
RPH3AQ9Y2J0 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
RPH3AQ9Y2J0 TEX30-205ENST00000376029 959 ntTSL 2 BASIC15.94■□□□□ 0.14
RPH3AQ9Y2J0 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
RPH3AQ9Y2J0 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC15.94■□□□□ 0.14
RPH3AQ9Y2J0 RPP21-221ENST00000428040 594 ntTSL 2 BASIC15.94■□□□□ 0.14
RPH3AQ9Y2J0 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
RPH3AQ9Y2J0 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC15.94■□□□□ 0.14
RPH3AQ9Y2J0 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC15.94■□□□□ 0.14
RPH3AQ9Y2J0 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC15.94■□□□□ 0.14
RPH3AQ9Y2J0 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC15.94■□□□□ 0.14
RPH3AQ9Y2J0 IRF8-202ENST00000562492 946 ntTSL 3 BASIC15.94■□□□□ 0.14
RPH3AQ9Y2J0 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC15.94■□□□□ 0.14
RPH3AQ9Y2J0 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC15.94■□□□□ 0.14
RPH3AQ9Y2J0 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC15.94■□□□□ 0.14
RPH3AQ9Y2J0 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC15.94■□□□□ 0.14
RPH3AQ9Y2J0 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC15.94■□□□□ 0.14
RPH3AQ9Y2J0 AL355312.1-201ENST00000407115 2176 ntBASIC15.94■□□□□ 0.14
RPH3AQ9Y2J0 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
RPH3AQ9Y2J0 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
RPH3AQ9Y2J0 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
RPH3AQ9Y2J0 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
RPH3AQ9Y2J0 CROCCP1-201ENST00000426910 5675 ntBASIC15.94■□□□□ 0.14
RPH3AQ9Y2J0 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
RPH3AQ9Y2J0 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC15.94■□□□□ 0.14
RPH3AQ9Y2J0 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
RPH3AQ9Y2J0 LINC00896-202ENST00000609602 2128 ntBASIC15.94■□□□□ 0.14
RPH3AQ9Y2J0 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
RPH3AQ9Y2J0 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
RPH3AQ9Y2J0 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
RPH3AQ9Y2J0 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
RPH3AQ9Y2J0 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
RPH3AQ9Y2J0 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
RPH3AQ9Y2J0 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
RPH3AQ9Y2J0 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC15.93■□□□□ 0.14
RPH3AQ9Y2J0 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
RPH3AQ9Y2J0 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC15.93■□□□□ 0.14
RPH3AQ9Y2J0 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
RPH3AQ9Y2J0 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
RPH3AQ9Y2J0 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC15.93■□□□□ 0.14
RPH3AQ9Y2J0 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC15.93■□□□□ 0.14
RPH3AQ9Y2J0 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
RPH3AQ9Y2J0 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
RPH3AQ9Y2J0 AL049757.1-201ENST00000616842 1596 ntBASIC15.93■□□□□ 0.14
RPH3AQ9Y2J0 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
RPH3AQ9Y2J0 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
RPH3AQ9Y2J0 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC15.93■□□□□ 0.14
RPH3AQ9Y2J0 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
RPH3AQ9Y2J0 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC15.93■□□□□ 0.14
RPH3AQ9Y2J0 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
RPH3AQ9Y2J0 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
RPH3AQ9Y2J0 SOD2-201ENST00000337404 991 ntTSL 2 BASIC15.93■□□□□ 0.14
RPH3AQ9Y2J0 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 84.1 ms