Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SSX2IPQ9Y2D8 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
SSX2IPQ9Y2D8 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SSX2IPQ9Y2D8 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SSX2IPQ9Y2D8 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
SSX2IPQ9Y2D8 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
SSX2IPQ9Y2D8 EFTUD1P1-204ENST00000560401 1798 ntBASIC18.66■□□□□ 0.58
SSX2IPQ9Y2D8 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC18.66■□□□□ 0.58
SSX2IPQ9Y2D8 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC18.66■□□□□ 0.58
SSX2IPQ9Y2D8 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SSX2IPQ9Y2D8 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
SSX2IPQ9Y2D8 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
SSX2IPQ9Y2D8 ATP6V0CP3-201ENST00000417255 467 ntBASIC18.66■□□□□ 0.58
SSX2IPQ9Y2D8 MCCD1P2-201ENST00000423228 335 ntBASIC18.66■□□□□ 0.58
SSX2IPQ9Y2D8 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC18.66■□□□□ 0.58
SSX2IPQ9Y2D8 STK19B-204ENST00000512515 211 ntBASIC18.66■□□□□ 0.58
SSX2IPQ9Y2D8 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC18.66■□□□□ 0.58
SSX2IPQ9Y2D8 COX5A-206ENST00000568783 571 ntTSL 3 BASIC18.66■□□□□ 0.58
SSX2IPQ9Y2D8 TMED1-207ENST00000591695 809 ntTSL 5 BASIC18.66■□□□□ 0.58
SSX2IPQ9Y2D8 AC008667.4-201ENST00000607370 168 ntBASIC18.66■□□□□ 0.58
SSX2IPQ9Y2D8 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC18.66■□□□□ 0.58
SSX2IPQ9Y2D8 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SSX2IPQ9Y2D8 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SSX2IPQ9Y2D8 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SSX2IPQ9Y2D8 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
SSX2IPQ9Y2D8 PC-208ENST00000529047 1607 ntTSL 3 BASIC18.66■□□□□ 0.58
SSX2IPQ9Y2D8 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SSX2IPQ9Y2D8 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC18.66■□□□□ 0.58
SSX2IPQ9Y2D8 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
SSX2IPQ9Y2D8 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SSX2IPQ9Y2D8 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SSX2IPQ9Y2D8 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
SSX2IPQ9Y2D8 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC18.66■□□□□ 0.58
SSX2IPQ9Y2D8 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC18.66■□□□□ 0.58
SSX2IPQ9Y2D8 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
SSX2IPQ9Y2D8 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC18.66■□□□□ 0.58
SSX2IPQ9Y2D8 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SSX2IPQ9Y2D8 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC18.65■□□□□ 0.58
SSX2IPQ9Y2D8 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
SSX2IPQ9Y2D8 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC18.65■□□□□ 0.58
SSX2IPQ9Y2D8 AC006504.4-201ENST00000592118 1568 ntBASIC18.65■□□□□ 0.58
SSX2IPQ9Y2D8 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SSX2IPQ9Y2D8 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
SSX2IPQ9Y2D8 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
SSX2IPQ9Y2D8 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SSX2IPQ9Y2D8 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
SSX2IPQ9Y2D8 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC18.65■□□□□ 0.58
SSX2IPQ9Y2D8 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SSX2IPQ9Y2D8 ELK2BP-201ENST00000415014 1224 ntBASIC18.65■□□□□ 0.58
SSX2IPQ9Y2D8 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SSX2IPQ9Y2D8 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SSX2IPQ9Y2D8 IGHV3-65-201ENST00000523210 341 ntBASIC18.65■□□□□ 0.58
SSX2IPQ9Y2D8 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC18.65■□□□□ 0.58
SSX2IPQ9Y2D8 AC109462.3-201ENST00000573934 613 ntBASIC18.65■□□□□ 0.58
SSX2IPQ9Y2D8 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC18.65■□□□□ 0.58
SSX2IPQ9Y2D8 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC18.65■□□□□ 0.58
SSX2IPQ9Y2D8 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC18.65■□□□□ 0.58
SSX2IPQ9Y2D8 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC18.65■□□□□ 0.58
SSX2IPQ9Y2D8 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
SSX2IPQ9Y2D8 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC18.65■□□□□ 0.58
SSX2IPQ9Y2D8 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
SSX2IPQ9Y2D8 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
SSX2IPQ9Y2D8 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC18.65■□□□□ 0.58
SSX2IPQ9Y2D8 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
SSX2IPQ9Y2D8 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC18.65■□□□□ 0.58
SSX2IPQ9Y2D8 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SSX2IPQ9Y2D8 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC18.65■□□□□ 0.58
SSX2IPQ9Y2D8 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SSX2IPQ9Y2D8 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC18.65■□□□□ 0.58
SSX2IPQ9Y2D8 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
SSX2IPQ9Y2D8 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
SSX2IPQ9Y2D8 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
SSX2IPQ9Y2D8 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.58
SSX2IPQ9Y2D8 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SSX2IPQ9Y2D8 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC18.64■□□□□ 0.57
SSX2IPQ9Y2D8 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
SSX2IPQ9Y2D8 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SSX2IPQ9Y2D8 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC18.64■□□□□ 0.57
SSX2IPQ9Y2D8 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
SSX2IPQ9Y2D8 MYCLP1-201ENST00000372451 1075 ntBASIC18.64■□□□□ 0.57
SSX2IPQ9Y2D8 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC18.64■□□□□ 0.57
SSX2IPQ9Y2D8 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC18.64■□□□□ 0.57
SSX2IPQ9Y2D8 AC211486.1-202ENST00000416371 468 ntBASIC18.64■□□□□ 0.57
SSX2IPQ9Y2D8 RPS8P6-201ENST00000426177 609 ntBASIC18.64■□□□□ 0.57
SSX2IPQ9Y2D8 VN2R19P-201ENST00000442399 1052 ntBASIC18.64■□□□□ 0.57
SSX2IPQ9Y2D8 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC18.64■□□□□ 0.57
SSX2IPQ9Y2D8 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC18.64■□□□□ 0.57
SSX2IPQ9Y2D8 RPS15P9-201ENST00000494093 319 ntBASIC18.64■□□□□ 0.57
SSX2IPQ9Y2D8 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
SSX2IPQ9Y2D8 AC211476.1-201ENST00000503899 468 ntBASIC18.64■□□□□ 0.57
SSX2IPQ9Y2D8 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC18.64■□□□□ 0.57
SSX2IPQ9Y2D8 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC18.64■□□□□ 0.57
SSX2IPQ9Y2D8 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC18.64■□□□□ 0.57
SSX2IPQ9Y2D8 MIR4751-201ENST00000578027 74 ntBASIC18.64■□□□□ 0.57
SSX2IPQ9Y2D8 AC019129.2-201ENST00000609837 1235 ntBASIC18.64■□□□□ 0.57
SSX2IPQ9Y2D8 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC18.64■□□□□ 0.57
SSX2IPQ9Y2D8 AC134684.3-201ENST00000641758 218 ntBASIC18.64■□□□□ 0.57
SSX2IPQ9Y2D8 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SSX2IPQ9Y2D8 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC18.64■□□□□ 0.57
SSX2IPQ9Y2D8 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms