Protein–RNA interactions for Protein: Q9UPM8

AP4E1, AP-4 complex subunit epsilon-1, humanhuman

Predictions only

Length 1,137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1Q9UPM8 AC073592.4-201ENST00000623827 446 ntBASIC18.01■□□□□ 0.47
AP4E1Q9UPM8 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC18.01■□□□□ 0.47
AP4E1Q9UPM8 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
AP4E1Q9UPM8 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC18.01■□□□□ 0.47
AP4E1Q9UPM8 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
AP4E1Q9UPM8 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
AP4E1Q9UPM8 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC18.01■□□□□ 0.47
AP4E1Q9UPM8 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC18.01■□□□□ 0.47
AP4E1Q9UPM8 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
AP4E1Q9UPM8 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
AP4E1Q9UPM8 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC18.01■□□□□ 0.47
AP4E1Q9UPM8 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
AP4E1Q9UPM8 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC18.01■□□□□ 0.47
AP4E1Q9UPM8 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC18.01■□□□□ 0.47
AP4E1Q9UPM8 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
AP4E1Q9UPM8 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC18■□□□□ 0.47
AP4E1Q9UPM8 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC18■□□□□ 0.47
AP4E1Q9UPM8 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
AP4E1Q9UPM8 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC18■□□□□ 0.47
AP4E1Q9UPM8 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC18■□□□□ 0.47
AP4E1Q9UPM8 RHBDF1P1-201ENST00000427504 1941 ntBASIC18■□□□□ 0.47
AP4E1Q9UPM8 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
AP4E1Q9UPM8 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
AP4E1Q9UPM8 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC18■□□□□ 0.47
AP4E1Q9UPM8 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC18■□□□□ 0.47
AP4E1Q9UPM8 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC18■□□□□ 0.47
AP4E1Q9UPM8 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC18■□□□□ 0.47
AP4E1Q9UPM8 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
AP4E1Q9UPM8 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC18■□□□□ 0.47
AP4E1Q9UPM8 AC020916.1-201ENST00000587762 1774 ntBASIC18■□□□□ 0.47
AP4E1Q9UPM8 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC18■□□□□ 0.47
AP4E1Q9UPM8 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
AP4E1Q9UPM8 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
AP4E1Q9UPM8 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
AP4E1Q9UPM8 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC18■□□□□ 0.47
AP4E1Q9UPM8 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
AP4E1Q9UPM8 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC18■□□□□ 0.47
AP4E1Q9UPM8 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC18■□□□□ 0.47
AP4E1Q9UPM8 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC18■□□□□ 0.47
AP4E1Q9UPM8 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC18■□□□□ 0.47
AP4E1Q9UPM8 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC18■□□□□ 0.47
AP4E1Q9UPM8 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC18■□□□□ 0.47
AP4E1Q9UPM8 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC18■□□□□ 0.47
AP4E1Q9UPM8 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
AP4E1Q9UPM8 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC18■□□□□ 0.47
AP4E1Q9UPM8 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
AP4E1Q9UPM8 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC18■□□□□ 0.47
AP4E1Q9UPM8 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC18■□□□□ 0.47
AP4E1Q9UPM8 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
AP4E1Q9UPM8 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
AP4E1Q9UPM8 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
AP4E1Q9UPM8 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC18■□□□□ 0.47
AP4E1Q9UPM8 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
AP4E1Q9UPM8 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
AP4E1Q9UPM8 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
AP4E1Q9UPM8 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC17.99■□□□□ 0.47
AP4E1Q9UPM8 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
AP4E1Q9UPM8 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
AP4E1Q9UPM8 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
AP4E1Q9UPM8 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC17.99■□□□□ 0.47
AP4E1Q9UPM8 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC17.99■□□□□ 0.47
AP4E1Q9UPM8 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
AP4E1Q9UPM8 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
AP4E1Q9UPM8 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
AP4E1Q9UPM8 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
AP4E1Q9UPM8 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
AP4E1Q9UPM8 DFFB-203ENST00000341385 572 ntTSL 5 BASIC17.99■□□□□ 0.47
AP4E1Q9UPM8 RBM17P3-201ENST00000417687 1192 ntBASIC17.99■□□□□ 0.47
AP4E1Q9UPM8 SDHD-206ENST00000528182 754 ntTSL 3 BASIC17.99■□□□□ 0.47
AP4E1Q9UPM8 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC17.99■□□□□ 0.47
AP4E1Q9UPM8 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
AP4E1Q9UPM8 TBCB-205ENST00000585746 875 ntTSL 3 BASIC17.99■□□□□ 0.47
AP4E1Q9UPM8 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
AP4E1Q9UPM8 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
AP4E1Q9UPM8 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC17.99■□□□□ 0.47
AP4E1Q9UPM8 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
AP4E1Q9UPM8 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC17.99■□□□□ 0.47
AP4E1Q9UPM8 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
AP4E1Q9UPM8 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC17.99■□□□□ 0.47
AP4E1Q9UPM8 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC17.99■□□□□ 0.47
AP4E1Q9UPM8 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
AP4E1Q9UPM8 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC17.99■□□□□ 0.47
AP4E1Q9UPM8 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
AP4E1Q9UPM8 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC17.99■□□□□ 0.47
AP4E1Q9UPM8 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
AP4E1Q9UPM8 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
AP4E1Q9UPM8 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
AP4E1Q9UPM8 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC17.99■□□□□ 0.47
AP4E1Q9UPM8 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC17.98■□□□□ 0.47
AP4E1Q9UPM8 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
AP4E1Q9UPM8 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
AP4E1Q9UPM8 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
AP4E1Q9UPM8 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC17.98■□□□□ 0.47
AP4E1Q9UPM8 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
AP4E1Q9UPM8 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
AP4E1Q9UPM8 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
AP4E1Q9UPM8 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC17.98■□□□□ 0.47
AP4E1Q9UPM8 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
AP4E1Q9UPM8 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
AP4E1Q9UPM8 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms