Protein–RNA interactions for Protein: Q9NYD6

HOXC10, Homeobox protein Hox-C10, humanhuman

Predictions only

Length 342 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC10Q9NYD6 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HOXC10Q9NYD6 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC19.74■□□□□ 0.75
HOXC10Q9NYD6 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HOXC10Q9NYD6 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HOXC10Q9NYD6 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
HOXC10Q9NYD6 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC19.74■□□□□ 0.75
HOXC10Q9NYD6 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC19.74■□□□□ 0.75
HOXC10Q9NYD6 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC19.74■□□□□ 0.75
HOXC10Q9NYD6 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC19.74■□□□□ 0.75
HOXC10Q9NYD6 AC107918.2-201ENST00000530817 355 ntBASIC19.74■□□□□ 0.75
HOXC10Q9NYD6 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC19.74■□□□□ 0.75
HOXC10Q9NYD6 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC19.74■□□□□ 0.75
HOXC10Q9NYD6 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
HOXC10Q9NYD6 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC19.74■□□□□ 0.75
HOXC10Q9NYD6 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HOXC10Q9NYD6 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
HOXC10Q9NYD6 BSG-214ENST00000614867 960 ntTSL 3 BASIC19.74■□□□□ 0.75
HOXC10Q9NYD6 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC19.74■□□□□ 0.75
HOXC10Q9NYD6 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC19.74■□□□□ 0.75
HOXC10Q9NYD6 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC19.74■□□□□ 0.75
HOXC10Q9NYD6 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
HOXC10Q9NYD6 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
HOXC10Q9NYD6 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HOXC10Q9NYD6 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC19.74■□□□□ 0.75
HOXC10Q9NYD6 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
HOXC10Q9NYD6 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
HOXC10Q9NYD6 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
HOXC10Q9NYD6 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC19.73■□□□□ 0.75
HOXC10Q9NYD6 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
HOXC10Q9NYD6 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
HOXC10Q9NYD6 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HOXC10Q9NYD6 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
HOXC10Q9NYD6 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC19.73■□□□□ 0.75
HOXC10Q9NYD6 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC19.73■□□□□ 0.75
HOXC10Q9NYD6 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
HOXC10Q9NYD6 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC19.73■□□□□ 0.75
HOXC10Q9NYD6 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC19.73■□□□□ 0.75
HOXC10Q9NYD6 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
HOXC10Q9NYD6 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
HOXC10Q9NYD6 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC19.73■□□□□ 0.75
HOXC10Q9NYD6 ADH5P3-201ENST00000433842 1137 ntBASIC19.73■□□□□ 0.75
HOXC10Q9NYD6 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC19.73■□□□□ 0.75
HOXC10Q9NYD6 AC023141.5-201ENST00000458585 616 ntBASIC19.73■□□□□ 0.75
HOXC10Q9NYD6 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
HOXC10Q9NYD6 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC19.73■□□□□ 0.75
HOXC10Q9NYD6 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC19.73■□□□□ 0.75
HOXC10Q9NYD6 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
HOXC10Q9NYD6 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC19.73■□□□□ 0.75
HOXC10Q9NYD6 LSM12-202ENST00000585388 942 ntTSL 3 BASIC19.73■□□□□ 0.75
HOXC10Q9NYD6 AC092364.2-202ENST00000597012 1073 ntBASIC19.73■□□□□ 0.75
HOXC10Q9NYD6 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC19.73■□□□□ 0.75
HOXC10Q9NYD6 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HOXC10Q9NYD6 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC19.73■□□□□ 0.75
HOXC10Q9NYD6 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
HOXC10Q9NYD6 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC19.73■□□□□ 0.75
HOXC10Q9NYD6 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HOXC10Q9NYD6 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HOXC10Q9NYD6 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC19.73■□□□□ 0.75
HOXC10Q9NYD6 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HOXC10Q9NYD6 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
HOXC10Q9NYD6 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HOXC10Q9NYD6 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
HOXC10Q9NYD6 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC19.72■□□□□ 0.75
HOXC10Q9NYD6 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC19.72■□□□□ 0.75
HOXC10Q9NYD6 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC19.72■□□□□ 0.75
HOXC10Q9NYD6 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
HOXC10Q9NYD6 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC19.72■□□□□ 0.75
HOXC10Q9NYD6 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
HOXC10Q9NYD6 CBR1-202ENST00000399191 838 ntTSL 3 BASIC19.72■□□□□ 0.75
HOXC10Q9NYD6 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
HOXC10Q9NYD6 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
HOXC10Q9NYD6 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
HOXC10Q9NYD6 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC19.72■□□□□ 0.75
HOXC10Q9NYD6 MMP17-203ENST00000535004 719 ntTSL 3 BASIC19.72■□□□□ 0.75
HOXC10Q9NYD6 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC19.72■□□□□ 0.75
HOXC10Q9NYD6 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC19.72■□□□□ 0.75
HOXC10Q9NYD6 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
HOXC10Q9NYD6 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
HOXC10Q9NYD6 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HOXC10Q9NYD6 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
HOXC10Q9NYD6 HARS-203ENST00000431330 1774 ntTSL 2 BASIC19.72■□□□□ 0.75
HOXC10Q9NYD6 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
HOXC10Q9NYD6 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
HOXC10Q9NYD6 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HOXC10Q9NYD6 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
HOXC10Q9NYD6 HNRNPRP1-201ENST00000453465 1695 ntBASIC19.71■□□□□ 0.75
HOXC10Q9NYD6 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
HOXC10Q9NYD6 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC19.71■□□□□ 0.75
HOXC10Q9NYD6 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
HOXC10Q9NYD6 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
HOXC10Q9NYD6 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC19.71■□□□□ 0.75
HOXC10Q9NYD6 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
HOXC10Q9NYD6 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
HOXC10Q9NYD6 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC19.71■□□□□ 0.75
HOXC10Q9NYD6 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HOXC10Q9NYD6 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
HOXC10Q9NYD6 NME9-203ENST00000383180 2133 ntTSL 2 BASIC19.71■□□□□ 0.75
HOXC10Q9NYD6 AL355306.1-201ENST00000415580 579 ntBASIC19.71■□□□□ 0.75
HOXC10Q9NYD6 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC19.71■□□□□ 0.75
HOXC10Q9NYD6 TIMM8BP1-201ENST00000452384 211 ntBASIC19.71■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms