Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 FAM86GP-201ENST00000448322 971 ntBASIC19.32■□□□□ 0.68
PDLIM7Q9NR12 RBM7-207ENST00000544582 692 ntTSL 3 BASIC19.32■□□□□ 0.68
PDLIM7Q9NR12 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC19.32■□□□□ 0.68
PDLIM7Q9NR12 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC19.32■□□□□ 0.68
PDLIM7Q9NR12 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PDLIM7Q9NR12 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC19.32■□□□□ 0.68
PDLIM7Q9NR12 AL390955.2-201ENST00000603032 514 ntBASIC19.32■□□□□ 0.68
PDLIM7Q9NR12 AL035252.4-201ENST00000624174 288 ntBASIC19.32■□□□□ 0.68
PDLIM7Q9NR12 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC19.32■□□□□ 0.68
PDLIM7Q9NR12 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PDLIM7Q9NR12 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC19.32■□□□□ 0.68
PDLIM7Q9NR12 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PDLIM7Q9NR12 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PDLIM7Q9NR12 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC19.32■□□□□ 0.68
PDLIM7Q9NR12 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC19.32■□□□□ 0.68
PDLIM7Q9NR12 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC19.32■□□□□ 0.68
PDLIM7Q9NR12 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
PDLIM7Q9NR12 LYSMD4-203ENST00000378904 2122 ntBASIC19.31■□□□□ 0.68
PDLIM7Q9NR12 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC19.31■□□□□ 0.68
PDLIM7Q9NR12 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC19.31■□□□□ 0.68
PDLIM7Q9NR12 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PDLIM7Q9NR12 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
PDLIM7Q9NR12 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC19.31■□□□□ 0.68
PDLIM7Q9NR12 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PDLIM7Q9NR12 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PDLIM7Q9NR12 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC19.31■□□□□ 0.68
PDLIM7Q9NR12 RNF165-205ENST00000588679 2904 ntBASIC19.31■□□□□ 0.68
PDLIM7Q9NR12 KLK8-202ENST00000320838 456 ntTSL 5 BASIC19.31■□□□□ 0.68
PDLIM7Q9NR12 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
PDLIM7Q9NR12 AP002414.1-201ENST00000391405 1147 ntBASIC19.31■□□□□ 0.68
PDLIM7Q9NR12 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PDLIM7Q9NR12 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC19.31■□□□□ 0.68
PDLIM7Q9NR12 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PDLIM7Q9NR12 REXO1L3P-201ENST00000622202 1288 ntBASIC19.31■□□□□ 0.68
PDLIM7Q9NR12 Z92544.3-201ENST00000624747 417 ntBASIC19.31■□□□□ 0.68
PDLIM7Q9NR12 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC19.31■□□□□ 0.68
PDLIM7Q9NR12 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC19.31■□□□□ 0.68
PDLIM7Q9NR12 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PDLIM7Q9NR12 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PDLIM7Q9NR12 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PDLIM7Q9NR12 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC19.31■□□□□ 0.68
PDLIM7Q9NR12 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PDLIM7Q9NR12 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC19.31■□□□□ 0.68
PDLIM7Q9NR12 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PDLIM7Q9NR12 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
PDLIM7Q9NR12 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PDLIM7Q9NR12 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC19.3■□□□□ 0.68
PDLIM7Q9NR12 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PDLIM7Q9NR12 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PDLIM7Q9NR12 REM2-202ENST00000536884 1331 ntTSL 2 BASIC19.3■□□□□ 0.68
PDLIM7Q9NR12 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
PDLIM7Q9NR12 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PDLIM7Q9NR12 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
PDLIM7Q9NR12 AL121761.2-201ENST00000598007 1648 ntBASIC19.3■□□□□ 0.68
PDLIM7Q9NR12 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PDLIM7Q9NR12 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PDLIM7Q9NR12 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC19.3■□□□□ 0.68
PDLIM7Q9NR12 COPE-202ENST00000349893 948 ntTSL 2 BASIC19.3■□□□□ 0.68
PDLIM7Q9NR12 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC19.3■□□□□ 0.68
PDLIM7Q9NR12 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC19.3■□□□□ 0.68
PDLIM7Q9NR12 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC19.3■□□□□ 0.68
PDLIM7Q9NR12 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
PDLIM7Q9NR12 AC005034.1-201ENST00000426657 489 ntBASIC19.3■□□□□ 0.68
PDLIM7Q9NR12 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC19.3■□□□□ 0.68
PDLIM7Q9NR12 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC19.3■□□□□ 0.68
PDLIM7Q9NR12 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
PDLIM7Q9NR12 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC19.3■□□□□ 0.68
PDLIM7Q9NR12 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC19.3■□□□□ 0.68
PDLIM7Q9NR12 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC19.3■□□□□ 0.68
PDLIM7Q9NR12 AC093520.2-201ENST00000561830 333 ntBASIC19.3■□□□□ 0.68
PDLIM7Q9NR12 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
PDLIM7Q9NR12 AC068137.2-201ENST00000605408 478 ntBASIC19.3■□□□□ 0.68
PDLIM7Q9NR12 GGTLC5P-201ENST00000617623 998 ntBASIC19.3■□□□□ 0.68
PDLIM7Q9NR12 AJ011932.1-201ENST00000621707 465 ntBASIC19.3■□□□□ 0.68
PDLIM7Q9NR12 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC19.3■□□□□ 0.68
PDLIM7Q9NR12 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PDLIM7Q9NR12 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
PDLIM7Q9NR12 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
PDLIM7Q9NR12 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC19.3■□□□□ 0.68
PDLIM7Q9NR12 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PDLIM7Q9NR12 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PDLIM7Q9NR12 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PDLIM7Q9NR12 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PDLIM7Q9NR12 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC19.29■□□□□ 0.68
PDLIM7Q9NR12 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PDLIM7Q9NR12 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
PDLIM7Q9NR12 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PDLIM7Q9NR12 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC19.29■□□□□ 0.68
PDLIM7Q9NR12 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC19.29■□□□□ 0.68
PDLIM7Q9NR12 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PDLIM7Q9NR12 AC067852.2-201ENST00000590513 2313 ntBASIC19.29■□□□□ 0.68
PDLIM7Q9NR12 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PDLIM7Q9NR12 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PDLIM7Q9NR12 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PDLIM7Q9NR12 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
PDLIM7Q9NR12 AC015922.1-201ENST00000421102 1152 ntBASIC19.29■□□□□ 0.68
PDLIM7Q9NR12 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC19.29■□□□□ 0.68
PDLIM7Q9NR12 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC19.29■□□□□ 0.68
PDLIM7Q9NR12 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PDLIM7Q9NR12 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC19.29■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms