Protein–RNA interactions for Protein: Q9NQ40

SLC52A3, Solute carrier family 52, riboflavin transporter, member 3, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A3Q9NQ40 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC16.41■□□□□ 0.22
SLC52A3Q9NQ40 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC16.41■□□□□ 0.22
SLC52A3Q9NQ40 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SLC52A3Q9NQ40 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SLC52A3Q9NQ40 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
SLC52A3Q9NQ40 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SLC52A3Q9NQ40 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SLC52A3Q9NQ40 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC16.41■□□□□ 0.22
SLC52A3Q9NQ40 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC16.41■□□□□ 0.22
SLC52A3Q9NQ40 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SLC52A3Q9NQ40 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC16.41■□□□□ 0.22
SLC52A3Q9NQ40 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SLC52A3Q9NQ40 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SLC52A3Q9NQ40 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC16.41■□□□□ 0.22
SLC52A3Q9NQ40 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SLC52A3Q9NQ40 PCDHA1-201ENST00000378133 2726 ntBASIC16.4■□□□□ 0.22
SLC52A3Q9NQ40 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC16.4■□□□□ 0.22
SLC52A3Q9NQ40 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SLC52A3Q9NQ40 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SLC52A3Q9NQ40 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC16.4■□□□□ 0.22
SLC52A3Q9NQ40 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SLC52A3Q9NQ40 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC16.4■□□□□ 0.22
SLC52A3Q9NQ40 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
SLC52A3Q9NQ40 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SLC52A3Q9NQ40 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SLC52A3Q9NQ40 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SLC52A3Q9NQ40 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC16.4■□□□□ 0.22
SLC52A3Q9NQ40 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
SLC52A3Q9NQ40 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SLC52A3Q9NQ40 AC009336.1-201ENST00000608941 1553 ntBASIC16.4■□□□□ 0.22
SLC52A3Q9NQ40 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC16.4■□□□□ 0.22
SLC52A3Q9NQ40 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
SLC52A3Q9NQ40 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
SLC52A3Q9NQ40 HOMER2P1-201ENST00000455653 964 ntBASIC16.4■□□□□ 0.22
SLC52A3Q9NQ40 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SLC52A3Q9NQ40 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
SLC52A3Q9NQ40 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC16.4■□□□□ 0.22
SLC52A3Q9NQ40 AC097493.4-201ENST00000641197 219 ntBASIC16.4■□□□□ 0.22
SLC52A3Q9NQ40 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SLC52A3Q9NQ40 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC16.4■□□□□ 0.22
SLC52A3Q9NQ40 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC16.4■□□□□ 0.22
SLC52A3Q9NQ40 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
SLC52A3Q9NQ40 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SLC52A3Q9NQ40 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SLC52A3Q9NQ40 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SLC52A3Q9NQ40 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SLC52A3Q9NQ40 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC16.4■□□□□ 0.22
SLC52A3Q9NQ40 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SLC52A3Q9NQ40 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SLC52A3Q9NQ40 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC16.4■□□□□ 0.22
SLC52A3Q9NQ40 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
SLC52A3Q9NQ40 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC16.39■□□□□ 0.22
SLC52A3Q9NQ40 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
SLC52A3Q9NQ40 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
SLC52A3Q9NQ40 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC16.39■□□□□ 0.22
SLC52A3Q9NQ40 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
SLC52A3Q9NQ40 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SLC52A3Q9NQ40 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
SLC52A3Q9NQ40 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SLC52A3Q9NQ40 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SLC52A3Q9NQ40 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC16.39■□□□□ 0.21
SLC52A3Q9NQ40 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SLC52A3Q9NQ40 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SLC52A3Q9NQ40 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC16.39■□□□□ 0.21
SLC52A3Q9NQ40 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SLC52A3Q9NQ40 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
SLC52A3Q9NQ40 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SLC52A3Q9NQ40 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SLC52A3Q9NQ40 RNF152P1-201ENST00000397754 604 ntBASIC16.39■□□□□ 0.21
SLC52A3Q9NQ40 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC16.39■□□□□ 0.21
SLC52A3Q9NQ40 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC16.39■□□□□ 0.21
SLC52A3Q9NQ40 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SLC52A3Q9NQ40 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC16.39■□□□□ 0.21
SLC52A3Q9NQ40 AC083849.1-201ENST00000615227 514 ntBASIC16.39■□□□□ 0.21
SLC52A3Q9NQ40 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC16.39■□□□□ 0.21
SLC52A3Q9NQ40 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
SLC52A3Q9NQ40 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
SLC52A3Q9NQ40 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC16.39■□□□□ 0.21
SLC52A3Q9NQ40 GPR89P-201ENST00000407924 1495 ntBASIC16.39■□□□□ 0.21
SLC52A3Q9NQ40 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
SLC52A3Q9NQ40 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SLC52A3Q9NQ40 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SLC52A3Q9NQ40 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SLC52A3Q9NQ40 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SLC52A3Q9NQ40 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
SLC52A3Q9NQ40 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SLC52A3Q9NQ40 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
SLC52A3Q9NQ40 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SLC52A3Q9NQ40 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC16.38■□□□□ 0.21
SLC52A3Q9NQ40 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC16.38■□□□□ 0.21
SLC52A3Q9NQ40 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
SLC52A3Q9NQ40 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
SLC52A3Q9NQ40 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC16.38■□□□□ 0.21
SLC52A3Q9NQ40 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC16.38■□□□□ 0.21
SLC52A3Q9NQ40 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC16.38■□□□□ 0.21
SLC52A3Q9NQ40 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC16.38■□□□□ 0.21
SLC52A3Q9NQ40 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SLC52A3Q9NQ40 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SLC52A3Q9NQ40 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SLC52A3Q9NQ40 AC132938.5-201ENST00000624980 1813 ntBASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms