Protein–RNA interactions for Protein: Q9H2F9

CCDC68, Coiled-coil domain-containing protein 68, humanhuman

Predictions only

Length 335 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC68Q9H2F9 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC68Q9H2F9 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC68Q9H2F9 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC68Q9H2F9 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
CCDC68Q9H2F9 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC68Q9H2F9 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
CCDC68Q9H2F9 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
CCDC68Q9H2F9 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
CCDC68Q9H2F9 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC68Q9H2F9 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC17.44■□□□□ 0.38
CCDC68Q9H2F9 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC17.44■□□□□ 0.38
CCDC68Q9H2F9 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC68Q9H2F9 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC68Q9H2F9 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC68Q9H2F9 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC68Q9H2F9 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC68Q9H2F9 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC17.43■□□□□ 0.38
CCDC68Q9H2F9 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC17.43■□□□□ 0.38
CCDC68Q9H2F9 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC68Q9H2F9 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC68Q9H2F9 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
CCDC68Q9H2F9 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
CCDC68Q9H2F9 AC016734.2-201ENST00000624325 1377 ntBASIC17.43■□□□□ 0.38
CCDC68Q9H2F9 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
CCDC68Q9H2F9 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC68Q9H2F9 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC17.43■□□□□ 0.38
CCDC68Q9H2F9 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC68Q9H2F9 FAM220CP-201ENST00000395253 831 ntBASIC17.43■□□□□ 0.38
CCDC68Q9H2F9 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC68Q9H2F9 AC103564.2-201ENST00000432853 1299 ntBASIC17.43■□□□□ 0.38
CCDC68Q9H2F9 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC17.43■□□□□ 0.38
CCDC68Q9H2F9 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC68Q9H2F9 AL138831.2-201ENST00000606564 490 ntBASIC17.43■□□□□ 0.38
CCDC68Q9H2F9 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC68Q9H2F9 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC68Q9H2F9 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC68Q9H2F9 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC17.43■□□□□ 0.38
CCDC68Q9H2F9 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC17.43■□□□□ 0.38
CCDC68Q9H2F9 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
CCDC68Q9H2F9 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC17.43■□□□□ 0.38
CCDC68Q9H2F9 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC68Q9H2F9 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC68Q9H2F9 ACE-204ENST00000428043 5120 ntTSL 2 BASIC17.43■□□□□ 0.38
CCDC68Q9H2F9 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC68Q9H2F9 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC17.43■□□□□ 0.38
CCDC68Q9H2F9 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC68Q9H2F9 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC68Q9H2F9 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC68Q9H2F9 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC17.42■□□□□ 0.38
CCDC68Q9H2F9 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC68Q9H2F9 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
CCDC68Q9H2F9 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC17.42■□□□□ 0.38
CCDC68Q9H2F9 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC17.42■□□□□ 0.38
CCDC68Q9H2F9 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC68Q9H2F9 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC17.42■□□□□ 0.38
CCDC68Q9H2F9 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC68Q9H2F9 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC68Q9H2F9 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
CCDC68Q9H2F9 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC68Q9H2F9 DANCR-204ENST00000444958 709 ntTSL 3 BASIC17.42■□□□□ 0.38
CCDC68Q9H2F9 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC17.42■□□□□ 0.38
CCDC68Q9H2F9 AC122714.2-201ENST00000502787 707 ntBASIC17.42■□□□□ 0.38
CCDC68Q9H2F9 AC009533.2-201ENST00000543664 586 ntBASIC17.42■□□□□ 0.38
CCDC68Q9H2F9 AC109462.3-201ENST00000573934 613 ntBASIC17.42■□□□□ 0.38
CCDC68Q9H2F9 AC005336.2-201ENST00000593183 939 ntBASIC17.42■□□□□ 0.38
CCDC68Q9H2F9 Z69720.1-201ENST00000601483 472 ntBASIC17.42■□□□□ 0.38
CCDC68Q9H2F9 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
CCDC68Q9H2F9 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC68Q9H2F9 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC68Q9H2F9 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC68Q9H2F9 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC17.42■□□□□ 0.38
CCDC68Q9H2F9 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC68Q9H2F9 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC68Q9H2F9 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC68Q9H2F9 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC17.42■□□□□ 0.38
CCDC68Q9H2F9 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
CCDC68Q9H2F9 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
CCDC68Q9H2F9 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC68Q9H2F9 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC68Q9H2F9 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
CCDC68Q9H2F9 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
CCDC68Q9H2F9 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC17.41■□□□□ 0.38
CCDC68Q9H2F9 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC68Q9H2F9 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
CCDC68Q9H2F9 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
CCDC68Q9H2F9 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC17.41■□□□□ 0.38
CCDC68Q9H2F9 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC68Q9H2F9 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC68Q9H2F9 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC68Q9H2F9 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC17.41■□□□□ 0.38
CCDC68Q9H2F9 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC17.41■□□□□ 0.38
CCDC68Q9H2F9 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC17.41■□□□□ 0.38
CCDC68Q9H2F9 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC68Q9H2F9 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC68Q9H2F9 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC68Q9H2F9 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC68Q9H2F9 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC17.41■□□□□ 0.38
CCDC68Q9H2F9 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC17.41■□□□□ 0.38
CCDC68Q9H2F9 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC17.41■□□□□ 0.38
CCDC68Q9H2F9 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms