Protein–RNA interactions for Protein: Q9C0A0

CNTNAP4, Contactin-associated protein-like 4, humanhuman

Predictions only

Length 1,308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP4Q9C0A0 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CNTNAP4Q9C0A0 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
CNTNAP4Q9C0A0 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
CNTNAP4Q9C0A0 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CNTNAP4Q9C0A0 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CNTNAP4Q9C0A0 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
CNTNAP4Q9C0A0 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CNTNAP4Q9C0A0 LYSMD4-203ENST00000378904 2122 ntBASIC21.62■■□□□ 1.05
CNTNAP4Q9C0A0 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC21.62■■□□□ 1.05
CNTNAP4Q9C0A0 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC21.62■■□□□ 1.05
CNTNAP4Q9C0A0 AC004890.2-204ENST00000481968 304 ntBASIC21.62■■□□□ 1.05
CNTNAP4Q9C0A0 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC21.62■■□□□ 1.05
CNTNAP4Q9C0A0 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC21.62■■□□□ 1.05
CNTNAP4Q9C0A0 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC21.62■■□□□ 1.05
CNTNAP4Q9C0A0 AL031055.1-201ENST00000606362 631 ntBASIC21.62■■□□□ 1.05
CNTNAP4Q9C0A0 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
CNTNAP4Q9C0A0 STX6-204ENST00000542060 4809 ntTSL 2 BASIC21.62■■□□□ 1.05
CNTNAP4Q9C0A0 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CNTNAP4Q9C0A0 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CNTNAP4Q9C0A0 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC21.62■■□□□ 1.05
CNTNAP4Q9C0A0 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
CNTNAP4Q9C0A0 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC21.62■■□□□ 1.05
CNTNAP4Q9C0A0 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CNTNAP4Q9C0A0 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
CNTNAP4Q9C0A0 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC21.62■■□□□ 1.05
CNTNAP4Q9C0A0 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CNTNAP4Q9C0A0 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
CNTNAP4Q9C0A0 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC21.62■■□□□ 1.05
CNTNAP4Q9C0A0 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CNTNAP4Q9C0A0 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CNTNAP4Q9C0A0 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC21.61■■□□□ 1.05
CNTNAP4Q9C0A0 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CNTNAP4Q9C0A0 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
CNTNAP4Q9C0A0 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CNTNAP4Q9C0A0 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC21.61■■□□□ 1.05
CNTNAP4Q9C0A0 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC21.61■■□□□ 1.05
CNTNAP4Q9C0A0 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC21.61■■□□□ 1.05
CNTNAP4Q9C0A0 COQ6-210ENST00000554920 649 ntTSL 3 BASIC21.61■■□□□ 1.05
CNTNAP4Q9C0A0 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
CNTNAP4Q9C0A0 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CNTNAP4Q9C0A0 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
CNTNAP4Q9C0A0 SLC25A24-204ENST00000569674 2357 ntBASIC21.61■■□□□ 1.05
CNTNAP4Q9C0A0 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CNTNAP4Q9C0A0 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
CNTNAP4Q9C0A0 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
CNTNAP4Q9C0A0 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC21.61■■□□□ 1.05
CNTNAP4Q9C0A0 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CNTNAP4Q9C0A0 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC21.61■■□□□ 1.05
CNTNAP4Q9C0A0 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CNTNAP4Q9C0A0 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
CNTNAP4Q9C0A0 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC21.61■■□□□ 1.05
CNTNAP4Q9C0A0 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CNTNAP4Q9C0A0 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
CNTNAP4Q9C0A0 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
CNTNAP4Q9C0A0 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CNTNAP4Q9C0A0 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
CNTNAP4Q9C0A0 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC21.6■■□□□ 1.05
CNTNAP4Q9C0A0 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC21.6■■□□□ 1.05
CNTNAP4Q9C0A0 MRPS18AP1-201ENST00000414458 589 ntBASIC21.6■■□□□ 1.05
CNTNAP4Q9C0A0 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC21.6■■□□□ 1.05
CNTNAP4Q9C0A0 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC21.6■■□□□ 1.05
CNTNAP4Q9C0A0 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC21.6■■□□□ 1.05
CNTNAP4Q9C0A0 AL512638.1-201ENST00000457493 794 ntBASIC21.6■■□□□ 1.05
CNTNAP4Q9C0A0 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC21.6■■□□□ 1.05
CNTNAP4Q9C0A0 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
CNTNAP4Q9C0A0 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC21.6■■□□□ 1.05
CNTNAP4Q9C0A0 AC027307.2-201ENST00000591252 911 ntBASIC21.6■■□□□ 1.05
CNTNAP4Q9C0A0 COQ4-205ENST00000609948 956 ntTSL 2 BASIC21.6■■□□□ 1.05
CNTNAP4Q9C0A0 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC21.6■■□□□ 1.05
CNTNAP4Q9C0A0 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CNTNAP4Q9C0A0 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC21.6■■□□□ 1.05
CNTNAP4Q9C0A0 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC21.6■■□□□ 1.05
CNTNAP4Q9C0A0 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
CNTNAP4Q9C0A0 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CNTNAP4Q9C0A0 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
CNTNAP4Q9C0A0 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC21.6■■□□□ 1.05
CNTNAP4Q9C0A0 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CNTNAP4Q9C0A0 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CNTNAP4Q9C0A0 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CNTNAP4Q9C0A0 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
CNTNAP4Q9C0A0 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC21.6■■□□□ 1.05
CNTNAP4Q9C0A0 PODN-203ENST00000395871 2744 ntTSL 5 BASIC21.6■■□□□ 1.05
CNTNAP4Q9C0A0 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC21.6■■□□□ 1.05
CNTNAP4Q9C0A0 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC21.6■■□□□ 1.05
CNTNAP4Q9C0A0 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
CNTNAP4Q9C0A0 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CNTNAP4Q9C0A0 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CNTNAP4Q9C0A0 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CNTNAP4Q9C0A0 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CNTNAP4Q9C0A0 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC21.59■■□□□ 1.05
CNTNAP4Q9C0A0 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC21.59■■□□□ 1.05
CNTNAP4Q9C0A0 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC21.59■■□□□ 1.05
CNTNAP4Q9C0A0 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC21.59■■□□□ 1.05
CNTNAP4Q9C0A0 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
CNTNAP4Q9C0A0 SERBP1P5-201ENST00000510079 1181 ntBASIC21.59■■□□□ 1.05
CNTNAP4Q9C0A0 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC21.59■■□□□ 1.05
CNTNAP4Q9C0A0 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC21.59■■□□□ 1.05
CNTNAP4Q9C0A0 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC21.59■■□□□ 1.05
CNTNAP4Q9C0A0 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC21.59■■□□□ 1.05
CNTNAP4Q9C0A0 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC21.59■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 81.1 ms