Protein–RNA interactions for Protein: Q9BY71

LRRC3, Leucine-rich repeat-containing protein 3, humanhuman

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC3Q9BY71 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
LRRC3Q9BY71 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC18.06■□□□□ 0.48
LRRC3Q9BY71 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC18.06■□□□□ 0.48
LRRC3Q9BY71 PAWRP1-201ENST00000451083 565 ntBASIC18.06■□□□□ 0.48
LRRC3Q9BY71 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
LRRC3Q9BY71 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC18.06■□□□□ 0.48
LRRC3Q9BY71 CD63-210ENST00000550776 870 ntTSL 5 BASIC18.06■□□□□ 0.48
LRRC3Q9BY71 CYB561-216ENST00000582297 897 ntTSL 3 BASIC18.06■□□□□ 0.48
LRRC3Q9BY71 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC18.06■□□□□ 0.48
LRRC3Q9BY71 TK1-204ENST00000590430 683 ntTSL 3 BASIC18.06■□□□□ 0.48
LRRC3Q9BY71 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC18.06■□□□□ 0.48
LRRC3Q9BY71 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC18.06■□□□□ 0.48
LRRC3Q9BY71 LINC01451-201ENST00000623792 534 ntBASIC18.06■□□□□ 0.48
LRRC3Q9BY71 PCDHB18P-201ENST00000524813 2368 ntBASIC18.06■□□□□ 0.48
LRRC3Q9BY71 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
LRRC3Q9BY71 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LRRC3Q9BY71 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
LRRC3Q9BY71 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LRRC3Q9BY71 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
LRRC3Q9BY71 PODN-203ENST00000395871 2744 ntTSL 5 BASIC18.06■□□□□ 0.48
LRRC3Q9BY71 AC025580.3-201ENST00000617932 1424 ntBASIC18.06■□□□□ 0.48
LRRC3Q9BY71 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
LRRC3Q9BY71 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC18.05■□□□□ 0.48
LRRC3Q9BY71 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC18.05■□□□□ 0.48
LRRC3Q9BY71 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LRRC3Q9BY71 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC18.05■□□□□ 0.48
LRRC3Q9BY71 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC18.05■□□□□ 0.48
LRRC3Q9BY71 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC18.05■□□□□ 0.48
LRRC3Q9BY71 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LRRC3Q9BY71 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
LRRC3Q9BY71 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LRRC3Q9BY71 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC18.05■□□□□ 0.48
LRRC3Q9BY71 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC18.05■□□□□ 0.48
LRRC3Q9BY71 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
LRRC3Q9BY71 CD82-202ENST00000342935 967 ntTSL 5 BASIC18.05■□□□□ 0.48
LRRC3Q9BY71 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
LRRC3Q9BY71 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LRRC3Q9BY71 LBH-203ENST00000404397 543 ntTSL 4 BASIC18.05■□□□□ 0.48
LRRC3Q9BY71 AC254562.1-201ENST00000417586 456 ntBASIC18.05■□□□□ 0.48
LRRC3Q9BY71 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC18.05■□□□□ 0.48
LRRC3Q9BY71 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC18.05■□□□□ 0.48
LRRC3Q9BY71 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC18.05■□□□□ 0.48
LRRC3Q9BY71 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC18.05■□□□□ 0.48
LRRC3Q9BY71 AL031432.2-201ENST00000566714 459 ntBASIC18.05■□□□□ 0.48
LRRC3Q9BY71 AL928711.1-201ENST00000570165 459 ntBASIC18.05■□□□□ 0.48
LRRC3Q9BY71 AC027796.2-201ENST00000575326 344 ntBASIC18.05■□□□□ 0.48
LRRC3Q9BY71 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC18.05■□□□□ 0.48
LRRC3Q9BY71 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LRRC3Q9BY71 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
LRRC3Q9BY71 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC18.05■□□□□ 0.48
LRRC3Q9BY71 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
LRRC3Q9BY71 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
LRRC3Q9BY71 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
LRRC3Q9BY71 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC18.05■□□□□ 0.48
LRRC3Q9BY71 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LRRC3Q9BY71 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LRRC3Q9BY71 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
LRRC3Q9BY71 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LRRC3Q9BY71 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC18.04■□□□□ 0.48
LRRC3Q9BY71 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
LRRC3Q9BY71 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
LRRC3Q9BY71 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LRRC3Q9BY71 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LRRC3Q9BY71 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
LRRC3Q9BY71 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
LRRC3Q9BY71 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
LRRC3Q9BY71 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC18.04■□□□□ 0.48
LRRC3Q9BY71 CXCL1P1-201ENST00000502804 216 ntBASIC18.04■□□□□ 0.48
LRRC3Q9BY71 SMN2-210ENST00000511812 867 ntTSL 2 BASIC18.04■□□□□ 0.48
LRRC3Q9BY71 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC18.04■□□□□ 0.48
LRRC3Q9BY71 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC18.04■□□□□ 0.48
LRRC3Q9BY71 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LRRC3Q9BY71 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC18.04■□□□□ 0.48
LRRC3Q9BY71 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC18.04■□□□□ 0.48
LRRC3Q9BY71 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LRRC3Q9BY71 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LRRC3Q9BY71 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LRRC3Q9BY71 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LRRC3Q9BY71 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
LRRC3Q9BY71 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
LRRC3Q9BY71 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LRRC3Q9BY71 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LRRC3Q9BY71 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LRRC3Q9BY71 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LRRC3Q9BY71 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC18.03■□□□□ 0.48
LRRC3Q9BY71 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LRRC3Q9BY71 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
LRRC3Q9BY71 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
LRRC3Q9BY71 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LRRC3Q9BY71 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LRRC3Q9BY71 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
LRRC3Q9BY71 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
LRRC3Q9BY71 HMGN1P19-201ENST00000436976 333 ntBASIC18.03■□□□□ 0.48
LRRC3Q9BY71 FAM185BP-201ENST00000443595 716 ntBASIC18.03■□□□□ 0.48
LRRC3Q9BY71 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC18.03■□□□□ 0.48
LRRC3Q9BY71 AC074386.1-202ENST00000463561 864 ntBASIC18.03■□□□□ 0.48
LRRC3Q9BY71 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
LRRC3Q9BY71 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC18.03■□□□□ 0.48
LRRC3Q9BY71 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC18.03■□□□□ 0.48
LRRC3Q9BY71 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC18.03■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 90 ms