Protein–RNA interactions for Protein: Q9BUZ4

TRAF4, TNF receptor-associated factor 4, humanhuman

Predicted RBP Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4Q9BUZ4 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAF4Q9BUZ4 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAF4Q9BUZ4 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
TRAF4Q9BUZ4 DFFB-203ENST00000341385 572 ntTSL 5 BASIC15.57■□□□□ 0.08
TRAF4Q9BUZ4 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TRAF4Q9BUZ4 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC15.57■□□□□ 0.08
TRAF4Q9BUZ4 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAF4Q9BUZ4 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
TRAF4Q9BUZ4 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAF4Q9BUZ4 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC15.57■□□□□ 0.08
TRAF4Q9BUZ4 AC079781.3-201ENST00000449110 356 ntBASIC15.57■□□□□ 0.08
TRAF4Q9BUZ4 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAF4Q9BUZ4 AC009078.2-202ENST00000463353 338 ntBASIC15.57■□□□□ 0.08
TRAF4Q9BUZ4 BET1L-206ENST00000486280 665 ntTSL 3 BASIC15.57■□□□□ 0.08
TRAF4Q9BUZ4 BMF-207ENST00000559701 630 ntTSL 3 BASIC15.57■□□□□ 0.08
TRAF4Q9BUZ4 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC15.57■□□□□ 0.08
TRAF4Q9BUZ4 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC15.57■□□□□ 0.08
TRAF4Q9BUZ4 AP005901.3-202ENST00000581653 237 ntBASIC15.57■□□□□ 0.08
TRAF4Q9BUZ4 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
TRAF4Q9BUZ4 AC008687.5-201ENST00000593746 558 ntBASIC15.57■□□□□ 0.08
TRAF4Q9BUZ4 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC15.57■□□□□ 0.08
TRAF4Q9BUZ4 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC15.57■□□□□ 0.08
TRAF4Q9BUZ4 AL353801.3-201ENST00000609898 542 ntBASIC15.57■□□□□ 0.08
TRAF4Q9BUZ4 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TRAF4Q9BUZ4 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC15.57■□□□□ 0.08
TRAF4Q9BUZ4 GCK-209ENST00000616242 2260 ntTSL 5 BASIC15.57■□□□□ 0.08
TRAF4Q9BUZ4 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC15.57■□□□□ 0.08
TRAF4Q9BUZ4 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
TRAF4Q9BUZ4 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC15.57■□□□□ 0.08
TRAF4Q9BUZ4 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
TRAF4Q9BUZ4 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAF4Q9BUZ4 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC15.57■□□□□ 0.08
TRAF4Q9BUZ4 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAF4Q9BUZ4 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAF4Q9BUZ4 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TRAF4Q9BUZ4 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC15.57■□□□□ 0.08
TRAF4Q9BUZ4 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAF4Q9BUZ4 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC15.57■□□□□ 0.08
TRAF4Q9BUZ4 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC15.57■□□□□ 0.08
TRAF4Q9BUZ4 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TRAF4Q9BUZ4 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TRAF4Q9BUZ4 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRAF4Q9BUZ4 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
TRAF4Q9BUZ4 AC026691.1-201ENST00000602502 2017 ntBASIC15.56■□□□□ 0.08
TRAF4Q9BUZ4 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRAF4Q9BUZ4 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRAF4Q9BUZ4 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC15.56■□□□□ 0.08
TRAF4Q9BUZ4 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC15.56■□□□□ 0.08
TRAF4Q9BUZ4 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC15.56■□□□□ 0.08
TRAF4Q9BUZ4 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC15.56■□□□□ 0.08
TRAF4Q9BUZ4 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC15.56■□□□□ 0.08
TRAF4Q9BUZ4 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
TRAF4Q9BUZ4 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC15.56■□□□□ 0.08
TRAF4Q9BUZ4 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
TRAF4Q9BUZ4 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC15.56■□□□□ 0.08
TRAF4Q9BUZ4 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRAF4Q9BUZ4 DDT-203ENST00000403754 569 ntTSL 3 BASIC15.56■□□□□ 0.08
TRAF4Q9BUZ4 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC15.56■□□□□ 0.08
TRAF4Q9BUZ4 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC15.56■□□□□ 0.08
TRAF4Q9BUZ4 DDT-206ENST00000430101 573 ntTSL 2 BASIC15.56■□□□□ 0.08
TRAF4Q9BUZ4 CDV3-207ENST00000508481 661 ntTSL 3 BASIC15.56■□□□□ 0.08
TRAF4Q9BUZ4 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TRAF4Q9BUZ4 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC15.56■□□□□ 0.08
TRAF4Q9BUZ4 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TRAF4Q9BUZ4 GXYLT1P4-201ENST00000613576 1192 ntBASIC15.56■□□□□ 0.08
TRAF4Q9BUZ4 CCNC-219ENST00000627680 896 ntTSL 5 BASIC15.56■□□□□ 0.08
TRAF4Q9BUZ4 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC15.56■□□□□ 0.08
TRAF4Q9BUZ4 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC15.56■□□□□ 0.08
TRAF4Q9BUZ4 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRAF4Q9BUZ4 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
TRAF4Q9BUZ4 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TRAF4Q9BUZ4 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TRAF4Q9BUZ4 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC15.56■□□□□ 0.08
TRAF4Q9BUZ4 NME9-203ENST00000383180 2133 ntTSL 2 BASIC15.56■□□□□ 0.08
TRAF4Q9BUZ4 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRAF4Q9BUZ4 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRAF4Q9BUZ4 AL136379.1-201ENST00000623471 2642 ntBASIC15.56■□□□□ 0.08
TRAF4Q9BUZ4 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRAF4Q9BUZ4 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
TRAF4Q9BUZ4 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRAF4Q9BUZ4 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
TRAF4Q9BUZ4 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRAF4Q9BUZ4 CROCCP2-202ENST00000412962 2773 ntBASIC15.55■□□□□ 0.08
TRAF4Q9BUZ4 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
TRAF4Q9BUZ4 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TRAF4Q9BUZ4 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRAF4Q9BUZ4 PCDHA14-201ENST00000506751 2298 ntBASIC15.55■□□□□ 0.08
TRAF4Q9BUZ4 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC15.55■□□□□ 0.08
TRAF4Q9BUZ4 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
TRAF4Q9BUZ4 AL138688.1-201ENST00000624851 1594 ntBASIC15.55■□□□□ 0.08
TRAF4Q9BUZ4 ASL-204ENST00000395331 1538 ntTSL 5 BASIC15.55■□□□□ 0.08
TRAF4Q9BUZ4 AC009102.3-201ENST00000623118 1491 ntBASIC15.55■□□□□ 0.08
TRAF4Q9BUZ4 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRAF4Q9BUZ4 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
TRAF4Q9BUZ4 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRAF4Q9BUZ4 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TRAF4Q9BUZ4 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC15.55■□□□□ 0.08
TRAF4Q9BUZ4 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC15.55■□□□□ 0.08
TRAF4Q9BUZ4 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC15.55■□□□□ 0.08
TRAF4Q9BUZ4 KRT16P4-201ENST00000453883 522 ntBASIC15.55■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms