Protein–RNA interactions for Protein: Q9BSM1

PCGF1, Polycomb group RING finger protein 1, humanhuman

Predictions only

Length 259 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF1Q9BSM1 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PCGF1Q9BSM1 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
PCGF1Q9BSM1 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
PCGF1Q9BSM1 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PCGF1Q9BSM1 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC14.61□□□□□ -0.07
PCGF1Q9BSM1 FER1L4-210ENST00000615531 5998 ntBASIC14.61□□□□□ -0.07
PCGF1Q9BSM1 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC14.61□□□□□ -0.07
PCGF1Q9BSM1 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PCGF1Q9BSM1 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PCGF1Q9BSM1 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC14.61□□□□□ -0.07
PCGF1Q9BSM1 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
PCGF1Q9BSM1 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC14.6□□□□□ -0.07
PCGF1Q9BSM1 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
PCGF1Q9BSM1 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
PCGF1Q9BSM1 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
PCGF1Q9BSM1 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
PCGF1Q9BSM1 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
PCGF1Q9BSM1 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
PCGF1Q9BSM1 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
PCGF1Q9BSM1 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
PCGF1Q9BSM1 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
PCGF1Q9BSM1 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC14.6□□□□□ -0.07
PCGF1Q9BSM1 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC14.6□□□□□ -0.07
PCGF1Q9BSM1 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC14.6□□□□□ -0.07
PCGF1Q9BSM1 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
PCGF1Q9BSM1 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC14.6□□□□□ -0.07
PCGF1Q9BSM1 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
PCGF1Q9BSM1 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
PCGF1Q9BSM1 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
PCGF1Q9BSM1 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
PCGF1Q9BSM1 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
PCGF1Q9BSM1 EMD-201ENST00000369835 966 ntTSL 3 BASIC14.6□□□□□ -0.07
PCGF1Q9BSM1 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
PCGF1Q9BSM1 AF238378.1-201ENST00000526806 358 ntBASIC14.6□□□□□ -0.07
PCGF1Q9BSM1 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
PCGF1Q9BSM1 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC14.6□□□□□ -0.07
PCGF1Q9BSM1 IRF8-202ENST00000562492 946 ntTSL 3 BASIC14.6□□□□□ -0.07
PCGF1Q9BSM1 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
PCGF1Q9BSM1 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC14.6□□□□□ -0.07
PCGF1Q9BSM1 AC011467.2-201ENST00000598425 242 ntBASIC14.6□□□□□ -0.07
PCGF1Q9BSM1 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
PCGF1Q9BSM1 AC008608.2-201ENST00000606089 416 ntBASIC14.6□□□□□ -0.07
PCGF1Q9BSM1 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC14.6□□□□□ -0.07
PCGF1Q9BSM1 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC14.6□□□□□ -0.07
PCGF1Q9BSM1 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
PCGF1Q9BSM1 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
PCGF1Q9BSM1 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
PCGF1Q9BSM1 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
PCGF1Q9BSM1 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC14.6□□□□□ -0.07
PCGF1Q9BSM1 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC14.6□□□□□ -0.07
PCGF1Q9BSM1 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
PCGF1Q9BSM1 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
PCGF1Q9BSM1 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
PCGF1Q9BSM1 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC14.6□□□□□ -0.07
PCGF1Q9BSM1 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
PCGF1Q9BSM1 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC14.6□□□□□ -0.07
PCGF1Q9BSM1 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
PCGF1Q9BSM1 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
PCGF1Q9BSM1 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
PCGF1Q9BSM1 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
PCGF1Q9BSM1 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
PCGF1Q9BSM1 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC14.6□□□□□ -0.07
PCGF1Q9BSM1 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
PCGF1Q9BSM1 AL513477.1-201ENST00000602865 2407 ntBASIC14.6□□□□□ -0.07
PCGF1Q9BSM1 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
PCGF1Q9BSM1 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
PCGF1Q9BSM1 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
PCGF1Q9BSM1 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
PCGF1Q9BSM1 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
PCGF1Q9BSM1 AC018695.7-201ENST00000624587 2492 ntBASIC14.59□□□□□ -0.07
PCGF1Q9BSM1 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
PCGF1Q9BSM1 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PCGF1Q9BSM1 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC14.59□□□□□ -0.07
PCGF1Q9BSM1 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC14.59□□□□□ -0.07
PCGF1Q9BSM1 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC14.59□□□□□ -0.07
PCGF1Q9BSM1 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
PCGF1Q9BSM1 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
PCGF1Q9BSM1 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
PCGF1Q9BSM1 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC14.59□□□□□ -0.07
PCGF1Q9BSM1 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PCGF1Q9BSM1 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC14.59□□□□□ -0.07
PCGF1Q9BSM1 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PCGF1Q9BSM1 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
PCGF1Q9BSM1 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
PCGF1Q9BSM1 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC14.59□□□□□ -0.07
PCGF1Q9BSM1 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
PCGF1Q9BSM1 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC14.59□□□□□ -0.07
PCGF1Q9BSM1 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
PCGF1Q9BSM1 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PCGF1Q9BSM1 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PCGF1Q9BSM1 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC14.59□□□□□ -0.07
PCGF1Q9BSM1 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC14.59□□□□□ -0.07
PCGF1Q9BSM1 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
PCGF1Q9BSM1 AC009078.2-202ENST00000463353 338 ntBASIC14.59□□□□□ -0.07
PCGF1Q9BSM1 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC14.59□□□□□ -0.07
PCGF1Q9BSM1 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC14.59□□□□□ -0.07
PCGF1Q9BSM1 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC14.59□□□□□ -0.07
PCGF1Q9BSM1 GZMM-202ENST00000592501 941 ntTSL 3 BASIC14.59□□□□□ -0.07
PCGF1Q9BSM1 AC116407.2-201ENST00000613639 860 ntBASIC14.59□□□□□ -0.07
PCGF1Q9BSM1 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC14.59□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms