Protein–RNA interactions for Protein: Q99618

CDCA3, Cell division cycle-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3Q99618 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC17.9■□□□□ 0.46
CDCA3Q99618 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC17.9■□□□□ 0.46
CDCA3Q99618 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CDCA3Q99618 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CDCA3Q99618 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC17.9■□□□□ 0.46
CDCA3Q99618 CRB3P1-201ENST00000449338 276 ntBASIC17.9■□□□□ 0.46
CDCA3Q99618 ALG1L8P-201ENST00000533887 760 ntBASIC17.9■□□□□ 0.46
CDCA3Q99618 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC17.9■□□□□ 0.46
CDCA3Q99618 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC17.9■□□□□ 0.46
CDCA3Q99618 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC17.9■□□□□ 0.46
CDCA3Q99618 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CDCA3Q99618 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.46
CDCA3Q99618 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
CDCA3Q99618 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CDCA3Q99618 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CDCA3Q99618 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CDCA3Q99618 HNRNPRP1-201ENST00000453465 1695 ntBASIC17.9■□□□□ 0.46
CDCA3Q99618 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
CDCA3Q99618 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.46
CDCA3Q99618 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.46
CDCA3Q99618 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC17.89■□□□□ 0.46
CDCA3Q99618 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC17.89■□□□□ 0.46
CDCA3Q99618 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.46
CDCA3Q99618 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC17.89■□□□□ 0.46
CDCA3Q99618 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
CDCA3Q99618 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CDCA3Q99618 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CDCA3Q99618 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC17.89■□□□□ 0.45
CDCA3Q99618 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
CDCA3Q99618 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
CDCA3Q99618 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CDCA3Q99618 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC17.89■□□□□ 0.45
CDCA3Q99618 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CDCA3Q99618 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CDCA3Q99618 GOLGA6L11P-201ENST00000417252 1298 ntBASIC17.89■□□□□ 0.45
CDCA3Q99618 GSAP-205ENST00000430584 600 ntTSL 5 BASIC17.89■□□□□ 0.45
CDCA3Q99618 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CDCA3Q99618 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC17.89■□□□□ 0.45
CDCA3Q99618 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC17.89■□□□□ 0.45
CDCA3Q99618 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CDCA3Q99618 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC17.89■□□□□ 0.45
CDCA3Q99618 MIR3909-201ENST00000579518 119 ntBASIC17.89■□□□□ 0.45
CDCA3Q99618 SSH2-211ENST00000590153 570 ntTSL 4 BASIC17.89■□□□□ 0.45
CDCA3Q99618 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC17.89■□□□□ 0.45
CDCA3Q99618 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC17.89■□□□□ 0.45
CDCA3Q99618 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CDCA3Q99618 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CDCA3Q99618 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
CDCA3Q99618 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC17.89■□□□□ 0.45
CDCA3Q99618 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CDCA3Q99618 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CDCA3Q99618 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CDCA3Q99618 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CDCA3Q99618 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
CDCA3Q99618 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC17.88■□□□□ 0.45
CDCA3Q99618 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CDCA3Q99618 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
CDCA3Q99618 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
CDCA3Q99618 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CDCA3Q99618 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC17.88■□□□□ 0.45
CDCA3Q99618 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC17.88■□□□□ 0.45
CDCA3Q99618 PPP6R2P1-201ENST00000450880 1275 ntBASIC17.88■□□□□ 0.45
CDCA3Q99618 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CDCA3Q99618 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
CDCA3Q99618 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC17.88■□□□□ 0.45
CDCA3Q99618 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC17.88■□□□□ 0.45
CDCA3Q99618 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC17.88■□□□□ 0.45
CDCA3Q99618 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CDCA3Q99618 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CDCA3Q99618 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CDCA3Q99618 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
CDCA3Q99618 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CDCA3Q99618 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC17.88■□□□□ 0.45
CDCA3Q99618 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CDCA3Q99618 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
CDCA3Q99618 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
CDCA3Q99618 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC17.87■□□□□ 0.45
CDCA3Q99618 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC17.87■□□□□ 0.45
CDCA3Q99618 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC17.87■□□□□ 0.45
CDCA3Q99618 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
CDCA3Q99618 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
CDCA3Q99618 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CDCA3Q99618 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
CDCA3Q99618 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
CDCA3Q99618 AC241585.1-201ENST00000433527 519 ntBASIC17.87■□□□□ 0.45
CDCA3Q99618 HLA-J-202ENST00000469281 1241 ntBASIC17.87■□□□□ 0.45
CDCA3Q99618 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC17.87■□□□□ 0.45
CDCA3Q99618 AP000842.3-202ENST00000569238 1080 ntBASIC17.87■□□□□ 0.45
CDCA3Q99618 AC009118.2-201ENST00000613275 655 ntBASIC17.87■□□□□ 0.45
CDCA3Q99618 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CDCA3Q99618 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CDCA3Q99618 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
CDCA3Q99618 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CDCA3Q99618 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CDCA3Q99618 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CDCA3Q99618 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC17.87■□□□□ 0.45
CDCA3Q99618 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CDCA3Q99618 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CDCA3Q99618 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC17.86■□□□□ 0.45
CDCA3Q99618 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms