Protein–RNA interactions for Protein: Q96NT5

SLC46A1, Proton-coupled folate transporter, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC46A1Q96NT5 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SLC46A1Q96NT5 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
SLC46A1Q96NT5 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
SLC46A1Q96NT5 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
SLC46A1Q96NT5 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SLC46A1Q96NT5 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SLC46A1Q96NT5 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC16.57■□□□□ 0.24
SLC46A1Q96NT5 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SLC46A1Q96NT5 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
SLC46A1Q96NT5 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SLC46A1Q96NT5 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
SLC46A1Q96NT5 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SLC46A1Q96NT5 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC16.57■□□□□ 0.24
SLC46A1Q96NT5 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SLC46A1Q96NT5 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SLC46A1Q96NT5 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SLC46A1Q96NT5 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
SLC46A1Q96NT5 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC16.57■□□□□ 0.24
SLC46A1Q96NT5 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC16.57■□□□□ 0.24
SLC46A1Q96NT5 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SLC46A1Q96NT5 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SLC46A1Q96NT5 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SLC46A1Q96NT5 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SLC46A1Q96NT5 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SLC46A1Q96NT5 FAM58CP-201ENST00000435741 640 ntBASIC16.57■□□□□ 0.24
SLC46A1Q96NT5 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC16.57■□□□□ 0.24
SLC46A1Q96NT5 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC16.57■□□□□ 0.24
SLC46A1Q96NT5 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC16.57■□□□□ 0.24
SLC46A1Q96NT5 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC16.57■□□□□ 0.24
SLC46A1Q96NT5 CFL1-212ENST00000531413 636 ntTSL 3 BASIC16.57■□□□□ 0.24
SLC46A1Q96NT5 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC16.57■□□□□ 0.24
SLC46A1Q96NT5 RNF34-208ENST00000555076 593 ntTSL 3 BASIC16.57■□□□□ 0.24
SLC46A1Q96NT5 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC16.57■□□□□ 0.24
SLC46A1Q96NT5 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC16.57■□□□□ 0.24
SLC46A1Q96NT5 AC093028.1-201ENST00000622998 982 ntBASIC16.57■□□□□ 0.24
SLC46A1Q96NT5 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC16.57■□□□□ 0.24
SLC46A1Q96NT5 AC007064.4-201ENST00000637740 555 ntBASIC16.57■□□□□ 0.24
SLC46A1Q96NT5 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SLC46A1Q96NT5 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SLC46A1Q96NT5 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
SLC46A1Q96NT5 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SLC46A1Q96NT5 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC16.57■□□□□ 0.24
SLC46A1Q96NT5 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SLC46A1Q96NT5 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
SLC46A1Q96NT5 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SLC46A1Q96NT5 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
SLC46A1Q96NT5 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
SLC46A1Q96NT5 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SLC46A1Q96NT5 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SLC46A1Q96NT5 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC16.56■□□□□ 0.24
SLC46A1Q96NT5 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC16.56■□□□□ 0.24
SLC46A1Q96NT5 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC16.56■□□□□ 0.24
SLC46A1Q96NT5 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC16.56■□□□□ 0.24
SLC46A1Q96NT5 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SLC46A1Q96NT5 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC16.56■□□□□ 0.24
SLC46A1Q96NT5 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
SLC46A1Q96NT5 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SLC46A1Q96NT5 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
SLC46A1Q96NT5 AC025580.3-201ENST00000617932 1424 ntBASIC16.56■□□□□ 0.24
SLC46A1Q96NT5 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SLC46A1Q96NT5 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SLC46A1Q96NT5 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SLC46A1Q96NT5 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC16.56■□□□□ 0.24
SLC46A1Q96NT5 DDX43P3-201ENST00000441064 443 ntBASIC16.56■□□□□ 0.24
SLC46A1Q96NT5 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SLC46A1Q96NT5 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SLC46A1Q96NT5 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC16.56■□□□□ 0.24
SLC46A1Q96NT5 SPCS2P1-201ENST00000561636 679 ntBASIC16.56■□□□□ 0.24
SLC46A1Q96NT5 OR7E47P-204ENST00000575924 449 ntBASIC16.56■□□□□ 0.24
SLC46A1Q96NT5 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
SLC46A1Q96NT5 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
SLC46A1Q96NT5 AC019129.2-201ENST00000609837 1235 ntBASIC16.56■□□□□ 0.24
SLC46A1Q96NT5 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
SLC46A1Q96NT5 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC16.56■□□□□ 0.24
SLC46A1Q96NT5 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SLC46A1Q96NT5 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SLC46A1Q96NT5 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
SLC46A1Q96NT5 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SLC46A1Q96NT5 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC16.56■□□□□ 0.24
SLC46A1Q96NT5 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
SLC46A1Q96NT5 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SLC46A1Q96NT5 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
SLC46A1Q96NT5 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC16.56■□□□□ 0.24
SLC46A1Q96NT5 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
SLC46A1Q96NT5 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC16.56■□□□□ 0.24
SLC46A1Q96NT5 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
SLC46A1Q96NT5 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SLC46A1Q96NT5 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SLC46A1Q96NT5 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SLC46A1Q96NT5 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SLC46A1Q96NT5 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC16.55■□□□□ 0.24
SLC46A1Q96NT5 AC008764.6-201ENST00000595909 2069 ntBASIC16.55■□□□□ 0.24
SLC46A1Q96NT5 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
SLC46A1Q96NT5 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SLC46A1Q96NT5 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
SLC46A1Q96NT5 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC16.55■□□□□ 0.24
SLC46A1Q96NT5 GATB-213ENST00000515812 1893 ntTSL 5 BASIC16.55■□□□□ 0.24
SLC46A1Q96NT5 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SLC46A1Q96NT5 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SLC46A1Q96NT5 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms