Protein–RNA interactions for Protein: Q96MX3

ZNF48, Zinc finger protein 48, humanhuman

Predicted RBP Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF48Q96MX3 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC14.13□□□□□ -0.15
ZNF48Q96MX3 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ZNF48Q96MX3 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
ZNF48Q96MX3 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
ZNF48Q96MX3 KLF4P1-201ENST00000412782 1185 ntBASIC14.13□□□□□ -0.15
ZNF48Q96MX3 SLC4A1APP2-201ENST00000424054 1259 ntBASIC14.13□□□□□ -0.15
ZNF48Q96MX3 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
ZNF48Q96MX3 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC14.13□□□□□ -0.15
ZNF48Q96MX3 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC14.13□□□□□ -0.15
ZNF48Q96MX3 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC14.13□□□□□ -0.15
ZNF48Q96MX3 MIR3687-2-201ENST00000577708 61 ntBASIC14.13□□□□□ -0.15
ZNF48Q96MX3 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC14.13□□□□□ -0.15
ZNF48Q96MX3 MIR3687-1-201ENST00000614492 61 ntBASIC14.13□□□□□ -0.15
ZNF48Q96MX3 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC14.13□□□□□ -0.15
ZNF48Q96MX3 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC14.13□□□□□ -0.15
ZNF48Q96MX3 FUT8-AS1-201ENST00000621019 1521 ntBASIC14.13□□□□□ -0.15
ZNF48Q96MX3 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC14.13□□□□□ -0.15
ZNF48Q96MX3 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC14.13□□□□□ -0.15
ZNF48Q96MX3 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ZNF48Q96MX3 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ZNF48Q96MX3 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
ZNF48Q96MX3 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ZNF48Q96MX3 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC14.13□□□□□ -0.15
ZNF48Q96MX3 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
ZNF48Q96MX3 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ZNF48Q96MX3 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ZNF48Q96MX3 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
ZNF48Q96MX3 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ZNF48Q96MX3 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
ZNF48Q96MX3 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
ZNF48Q96MX3 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ZNF48Q96MX3 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC14.12□□□□□ -0.15
ZNF48Q96MX3 PCDHB18P-201ENST00000524813 2368 ntBASIC14.12□□□□□ -0.15
ZNF48Q96MX3 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
ZNF48Q96MX3 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
ZNF48Q96MX3 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
ZNF48Q96MX3 AP000997.3-201ENST00000623333 2250 ntBASIC14.12□□□□□ -0.15
ZNF48Q96MX3 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC14.12□□□□□ -0.15
ZNF48Q96MX3 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
ZNF48Q96MX3 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ZNF48Q96MX3 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
ZNF48Q96MX3 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ZNF48Q96MX3 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
ZNF48Q96MX3 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC14.12□□□□□ -0.15
ZNF48Q96MX3 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ZNF48Q96MX3 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
ZNF48Q96MX3 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
ZNF48Q96MX3 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC14.12□□□□□ -0.15
ZNF48Q96MX3 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
ZNF48Q96MX3 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
ZNF48Q96MX3 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
ZNF48Q96MX3 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
ZNF48Q96MX3 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC14.12□□□□□ -0.15
ZNF48Q96MX3 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC14.12□□□□□ -0.15
ZNF48Q96MX3 AC109462.3-201ENST00000573934 613 ntBASIC14.12□□□□□ -0.15
ZNF48Q96MX3 AP001160.2-201ENST00000596071 487 ntBASIC14.12□□□□□ -0.15
ZNF48Q96MX3 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
ZNF48Q96MX3 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ZNF48Q96MX3 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ZNF48Q96MX3 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ZNF48Q96MX3 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ZNF48Q96MX3 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ZNF48Q96MX3 AC006116.8-202ENST00000587620 1550 ntBASIC14.12□□□□□ -0.15
ZNF48Q96MX3 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
ZNF48Q96MX3 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC14.12□□□□□ -0.15
ZNF48Q96MX3 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
ZNF48Q96MX3 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
ZNF48Q96MX3 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
ZNF48Q96MX3 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
ZNF48Q96MX3 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
ZNF48Q96MX3 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC14.11□□□□□ -0.15
ZNF48Q96MX3 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
ZNF48Q96MX3 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ZNF48Q96MX3 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
ZNF48Q96MX3 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
ZNF48Q96MX3 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC14.11□□□□□ -0.15
ZNF48Q96MX3 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ZNF48Q96MX3 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ZNF48Q96MX3 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ZNF48Q96MX3 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC14.11□□□□□ -0.15
ZNF48Q96MX3 CD276-203ENST00000537340 2439 ntTSL 2 BASIC14.11□□□□□ -0.15
ZNF48Q96MX3 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ZNF48Q96MX3 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
ZNF48Q96MX3 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
ZNF48Q96MX3 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC14.11□□□□□ -0.15
ZNF48Q96MX3 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC14.11□□□□□ -0.15
ZNF48Q96MX3 AC004967.1-201ENST00000453589 447 ntBASIC14.11□□□□□ -0.15
ZNF48Q96MX3 ARTN-206ENST00000472435 402 ntTSL 3 BASIC14.11□□□□□ -0.15
ZNF48Q96MX3 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
ZNF48Q96MX3 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC14.11□□□□□ -0.15
ZNF48Q96MX3 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
ZNF48Q96MX3 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC14.11□□□□□ -0.15
ZNF48Q96MX3 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
ZNF48Q96MX3 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
ZNF48Q96MX3 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC14.11□□□□□ -0.15
ZNF48Q96MX3 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC14.11□□□□□ -0.15
ZNF48Q96MX3 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC14.11□□□□□ -0.15
ZNF48Q96MX3 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC14.11□□□□□ -0.15
ZNF48Q96MX3 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC14.11□□□□□ -0.15
ZNF48Q96MX3 AC134684.3-201ENST00000641758 218 ntBASIC14.11□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms