Protein–RNA interactions for Protein: Q96M91

CFAP53, Cilia- and flagella-associated protein 53, humanhuman

Predictions only

Length 514 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP53Q96M91 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC23.17■■□□□ 1.3
CFAP53Q96M91 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CFAP53Q96M91 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CFAP53Q96M91 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CFAP53Q96M91 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC23.17■■□□□ 1.3
CFAP53Q96M91 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
CFAP53Q96M91 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC23.17■■□□□ 1.3
CFAP53Q96M91 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC23.17■■□□□ 1.3
CFAP53Q96M91 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CFAP53Q96M91 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC23.16■■□□□ 1.3
CFAP53Q96M91 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
CFAP53Q96M91 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CFAP53Q96M91 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC23.16■■□□□ 1.3
CFAP53Q96M91 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CFAP53Q96M91 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC23.16■■□□□ 1.3
CFAP53Q96M91 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC23.16■■□□□ 1.3
CFAP53Q96M91 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CFAP53Q96M91 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
CFAP53Q96M91 NABP1-203ENST00000409510 843 ntTSL 5 BASIC23.16■■□□□ 1.3
CFAP53Q96M91 RPS15P9-201ENST00000494093 319 ntBASIC23.16■■□□□ 1.3
CFAP53Q96M91 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
CFAP53Q96M91 WDR88-203ENST00000592765 651 ntTSL 5 BASIC23.16■■□□□ 1.3
CFAP53Q96M91 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC23.16■■□□□ 1.3
CFAP53Q96M91 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC23.16■■□□□ 1.3
CFAP53Q96M91 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC23.16■■□□□ 1.3
CFAP53Q96M91 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC23.16■■□□□ 1.3
CFAP53Q96M91 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CFAP53Q96M91 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC23.16■■□□□ 1.3
CFAP53Q96M91 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC23.15■■□□□ 1.3
CFAP53Q96M91 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC23.15■■□□□ 1.3
CFAP53Q96M91 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC23.15■■□□□ 1.3
CFAP53Q96M91 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
CFAP53Q96M91 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC23.15■■□□□ 1.3
CFAP53Q96M91 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CFAP53Q96M91 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC23.15■■□□□ 1.3
CFAP53Q96M91 PTCHD3P3-201ENST00000403073 906 ntBASIC23.15■■□□□ 1.3
CFAP53Q96M91 RPL13AP23-201ENST00000480739 586 ntBASIC23.15■■□□□ 1.3
CFAP53Q96M91 RNA5SP415-201ENST00000517246 115 ntBASIC23.15■■□□□ 1.3
CFAP53Q96M91 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC23.15■■□□□ 1.3
CFAP53Q96M91 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC23.15■■□□□ 1.3
CFAP53Q96M91 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC23.15■■□□□ 1.3
CFAP53Q96M91 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CFAP53Q96M91 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC23.15■■□□□ 1.3
CFAP53Q96M91 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CFAP53Q96M91 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC23.15■■□□□ 1.3
CFAP53Q96M91 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC23.15■■□□□ 1.3
CFAP53Q96M91 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
CFAP53Q96M91 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC23.14■■□□□ 1.3
CFAP53Q96M91 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
CFAP53Q96M91 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
CFAP53Q96M91 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
CFAP53Q96M91 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
CFAP53Q96M91 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC23.14■■□□□ 1.29
CFAP53Q96M91 AP002414.1-201ENST00000391405 1147 ntBASIC23.14■■□□□ 1.29
CFAP53Q96M91 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC23.14■■□□□ 1.29
CFAP53Q96M91 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC23.14■■□□□ 1.29
CFAP53Q96M91 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
CFAP53Q96M91 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC23.14■■□□□ 1.29
CFAP53Q96M91 UNC93B6-202ENST00000528242 690 ntBASIC23.14■■□□□ 1.29
CFAP53Q96M91 SLC25A1P1-201ENST00000528351 927 ntBASIC23.14■■□□□ 1.29
CFAP53Q96M91 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC23.14■■□□□ 1.29
CFAP53Q96M91 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC23.14■■□□□ 1.29
CFAP53Q96M91 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC23.14■■□□□ 1.29
CFAP53Q96M91 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC23.14■■□□□ 1.29
CFAP53Q96M91 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
CFAP53Q96M91 NME4-212ENST00000621774 904 ntTSL 3 BASIC23.14■■□□□ 1.29
CFAP53Q96M91 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
CFAP53Q96M91 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC23.14■■□□□ 1.29
CFAP53Q96M91 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC23.14■■□□□ 1.29
CFAP53Q96M91 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC23.14■■□□□ 1.29
CFAP53Q96M91 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
CFAP53Q96M91 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC23.14■■□□□ 1.29
CFAP53Q96M91 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
CFAP53Q96M91 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC23.14■■□□□ 1.29
CFAP53Q96M91 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC23.14■■□□□ 1.29
CFAP53Q96M91 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CFAP53Q96M91 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC23.13■■□□□ 1.29
CFAP53Q96M91 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CFAP53Q96M91 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CFAP53Q96M91 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC23.13■■□□□ 1.29
CFAP53Q96M91 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC23.13■■□□□ 1.29
CFAP53Q96M91 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC23.13■■□□□ 1.29
CFAP53Q96M91 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
CFAP53Q96M91 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC23.13■■□□□ 1.29
CFAP53Q96M91 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC23.13■■□□□ 1.29
CFAP53Q96M91 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC23.13■■□□□ 1.29
CFAP53Q96M91 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC23.13■■□□□ 1.29
CFAP53Q96M91 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC23.13■■□□□ 1.29
CFAP53Q96M91 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC23.13■■□□□ 1.29
CFAP53Q96M91 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC23.13■■□□□ 1.29
CFAP53Q96M91 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC23.13■■□□□ 1.29
CFAP53Q96M91 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CFAP53Q96M91 RPL18-209ENST00000550645 463 ntTSL 5 BASIC23.13■■□□□ 1.29
CFAP53Q96M91 RPL18-214ENST00000552588 559 ntTSL 3 BASIC23.13■■□□□ 1.29
CFAP53Q96M91 AC145285.3-201ENST00000564603 959 ntBASIC23.13■■□□□ 1.29
CFAP53Q96M91 AC008667.4-201ENST00000607370 168 ntBASIC23.13■■□□□ 1.29
CFAP53Q96M91 Z83851.2-201ENST00000609564 659 ntBASIC23.13■■□□□ 1.29
CFAP53Q96M91 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC23.13■■□□□ 1.29
CFAP53Q96M91 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC23.13■■□□□ 1.29
CFAP53Q96M91 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms