Protein–RNA interactions for Protein: Q96FZ7

CHMP6, Charged multivesicular body protein 6, humanhuman

Predictions only

Length 201 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6Q96FZ7 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
CHMP6Q96FZ7 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CHMP6Q96FZ7 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CHMP6Q96FZ7 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CHMP6Q96FZ7 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
CHMP6Q96FZ7 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CHMP6Q96FZ7 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
CHMP6Q96FZ7 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC17.52■□□□□ 0.4
CHMP6Q96FZ7 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
CHMP6Q96FZ7 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CHMP6Q96FZ7 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
CHMP6Q96FZ7 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CHMP6Q96FZ7 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC17.52■□□□□ 0.4
CHMP6Q96FZ7 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CHMP6Q96FZ7 MDFI-202ENST00000373050 809 ntTSL 2 BASIC17.52■□□□□ 0.4
CHMP6Q96FZ7 CRYGFP-201ENST00000418459 633 ntBASIC17.52■□□□□ 0.4
CHMP6Q96FZ7 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC17.52■□□□□ 0.4
CHMP6Q96FZ7 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CHMP6Q96FZ7 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC17.52■□□□□ 0.4
CHMP6Q96FZ7 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC17.52■□□□□ 0.4
CHMP6Q96FZ7 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CHMP6Q96FZ7 AC026471.5-201ENST00000615068 467 ntBASIC17.52■□□□□ 0.4
CHMP6Q96FZ7 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CHMP6Q96FZ7 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CHMP6Q96FZ7 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CHMP6Q96FZ7 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
CHMP6Q96FZ7 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CHMP6Q96FZ7 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
CHMP6Q96FZ7 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC17.52■□□□□ 0.39
CHMP6Q96FZ7 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
CHMP6Q96FZ7 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
CHMP6Q96FZ7 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CHMP6Q96FZ7 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CHMP6Q96FZ7 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
CHMP6Q96FZ7 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC17.51■□□□□ 0.39
CHMP6Q96FZ7 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
CHMP6Q96FZ7 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CHMP6Q96FZ7 AC024909.3-201ENST00000611513 2257 ntBASIC17.51■□□□□ 0.39
CHMP6Q96FZ7 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
CHMP6Q96FZ7 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC17.51■□□□□ 0.39
CHMP6Q96FZ7 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
CHMP6Q96FZ7 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC17.51■□□□□ 0.39
CHMP6Q96FZ7 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC17.51■□□□□ 0.39
CHMP6Q96FZ7 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
CHMP6Q96FZ7 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
CHMP6Q96FZ7 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CHMP6Q96FZ7 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC17.51■□□□□ 0.39
CHMP6Q96FZ7 MESTP1-201ENST00000404287 994 ntBASIC17.51■□□□□ 0.39
CHMP6Q96FZ7 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC17.51■□□□□ 0.39
CHMP6Q96FZ7 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC17.51■□□□□ 0.39
CHMP6Q96FZ7 LINC00167-201ENST00000530583 1419 ntBASIC17.51■□□□□ 0.39
CHMP6Q96FZ7 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CHMP6Q96FZ7 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC17.51■□□□□ 0.39
CHMP6Q96FZ7 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC17.51■□□□□ 0.39
CHMP6Q96FZ7 MIR3180-4-201ENST00000582223 153 ntBASIC17.51■□□□□ 0.39
CHMP6Q96FZ7 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC17.51■□□□□ 0.39
CHMP6Q96FZ7 Z99916.2-201ENST00000604037 246 ntBASIC17.51■□□□□ 0.39
CHMP6Q96FZ7 AP006294.2-201ENST00000641667 209 ntBASIC17.51■□□□□ 0.39
CHMP6Q96FZ7 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CHMP6Q96FZ7 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CHMP6Q96FZ7 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC17.51■□□□□ 0.39
CHMP6Q96FZ7 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
CHMP6Q96FZ7 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CHMP6Q96FZ7 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC17.51■□□□□ 0.39
CHMP6Q96FZ7 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC17.51■□□□□ 0.39
CHMP6Q96FZ7 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CHMP6Q96FZ7 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC17.51■□□□□ 0.39
CHMP6Q96FZ7 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CHMP6Q96FZ7 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CHMP6Q96FZ7 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CHMP6Q96FZ7 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CHMP6Q96FZ7 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CHMP6Q96FZ7 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
CHMP6Q96FZ7 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
CHMP6Q96FZ7 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CHMP6Q96FZ7 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
CHMP6Q96FZ7 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CHMP6Q96FZ7 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CHMP6Q96FZ7 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC17.5■□□□□ 0.39
CHMP6Q96FZ7 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CHMP6Q96FZ7 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CHMP6Q96FZ7 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
CHMP6Q96FZ7 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
CHMP6Q96FZ7 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CHMP6Q96FZ7 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
CHMP6Q96FZ7 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
CHMP6Q96FZ7 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC17.5■□□□□ 0.39
CHMP6Q96FZ7 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CHMP6Q96FZ7 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC17.5■□□□□ 0.39
CHMP6Q96FZ7 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CHMP6Q96FZ7 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC17.5■□□□□ 0.39
CHMP6Q96FZ7 AC008550.1-201ENST00000511500 884 ntBASIC17.5■□□□□ 0.39
CHMP6Q96FZ7 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC17.5■□□□□ 0.39
CHMP6Q96FZ7 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC17.5■□□□□ 0.39
CHMP6Q96FZ7 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC17.5■□□□□ 0.39
CHMP6Q96FZ7 GRAMD4P8-201ENST00000605465 1115 ntBASIC17.5■□□□□ 0.39
CHMP6Q96FZ7 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
CHMP6Q96FZ7 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC17.5■□□□□ 0.39
CHMP6Q96FZ7 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC17.5■□□□□ 0.39
CHMP6Q96FZ7 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms