Protein–RNA interactions for Protein: Q969E2

SCAMP4, Secretory carrier-associated membrane protein 4, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4Q969E2 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
SCAMP4Q969E2 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SCAMP4Q969E2 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
SCAMP4Q969E2 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
SCAMP4Q969E2 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
SCAMP4Q969E2 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SCAMP4Q969E2 CROCCP2-202ENST00000412962 2773 ntBASIC17.22■□□□□ 0.35
SCAMP4Q969E2 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SCAMP4Q969E2 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SCAMP4Q969E2 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC17.22■□□□□ 0.35
SCAMP4Q969E2 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC17.22■□□□□ 0.35
SCAMP4Q969E2 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC17.22■□□□□ 0.35
SCAMP4Q969E2 AP000347.1-202ENST00000435868 847 ntBASIC17.22■□□□□ 0.35
SCAMP4Q969E2 AC098831.1-202ENST00000438821 336 ntBASIC17.22■□□□□ 0.35
SCAMP4Q969E2 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC17.22■□□□□ 0.35
SCAMP4Q969E2 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC17.22■□□□□ 0.35
SCAMP4Q969E2 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC17.22■□□□□ 0.35
SCAMP4Q969E2 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
SCAMP4Q969E2 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
SCAMP4Q969E2 AL353135.1-201ENST00000606729 504 ntBASIC17.22■□□□□ 0.35
SCAMP4Q969E2 AL139424.1-201ENST00000607572 797 ntBASIC17.22■□□□□ 0.35
SCAMP4Q969E2 AC106820.2-201ENST00000563775 3264 ntBASIC17.22■□□□□ 0.35
SCAMP4Q969E2 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC17.22■□□□□ 0.35
SCAMP4Q969E2 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SCAMP4Q969E2 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
SCAMP4Q969E2 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
SCAMP4Q969E2 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SCAMP4Q969E2 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
SCAMP4Q969E2 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SCAMP4Q969E2 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SCAMP4Q969E2 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SCAMP4Q969E2 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SCAMP4Q969E2 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SCAMP4Q969E2 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC17.21■□□□□ 0.35
SCAMP4Q969E2 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC17.21■□□□□ 0.35
SCAMP4Q969E2 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC17.21■□□□□ 0.35
SCAMP4Q969E2 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
SCAMP4Q969E2 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SCAMP4Q969E2 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SCAMP4Q969E2 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC17.21■□□□□ 0.35
SCAMP4Q969E2 ACTG1P4-201ENST00000425123 1122 ntBASIC17.21■□□□□ 0.35
SCAMP4Q969E2 ARTN-206ENST00000472435 402 ntTSL 3 BASIC17.21■□□□□ 0.35
SCAMP4Q969E2 SLC25A1P1-201ENST00000528351 927 ntBASIC17.21■□□□□ 0.35
SCAMP4Q969E2 RPS29-206ENST00000557111 488 ntTSL 2 BASIC17.21■□□□□ 0.35
SCAMP4Q969E2 AL356488.2-201ENST00000602755 427 ntBASIC17.21■□□□□ 0.35
SCAMP4Q969E2 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SCAMP4Q969E2 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC17.21■□□□□ 0.35
SCAMP4Q969E2 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SCAMP4Q969E2 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
SCAMP4Q969E2 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
SCAMP4Q969E2 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
SCAMP4Q969E2 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC17.21■□□□□ 0.35
SCAMP4Q969E2 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
SCAMP4Q969E2 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SCAMP4Q969E2 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SCAMP4Q969E2 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.34
SCAMP4Q969E2 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.34
SCAMP4Q969E2 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
SCAMP4Q969E2 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SCAMP4Q969E2 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
SCAMP4Q969E2 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SCAMP4Q969E2 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
SCAMP4Q969E2 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
SCAMP4Q969E2 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC17.2■□□□□ 0.34
SCAMP4Q969E2 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SCAMP4Q969E2 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC17.2■□□□□ 0.34
SCAMP4Q969E2 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SCAMP4Q969E2 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC17.2■□□□□ 0.34
SCAMP4Q969E2 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SCAMP4Q969E2 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SCAMP4Q969E2 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
SCAMP4Q969E2 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SCAMP4Q969E2 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SCAMP4Q969E2 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC17.2■□□□□ 0.34
SCAMP4Q969E2 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SCAMP4Q969E2 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC17.2■□□□□ 0.34
SCAMP4Q969E2 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC17.2■□□□□ 0.34
SCAMP4Q969E2 IGHV3-22-201ENST00000520721 359 ntBASIC17.2■□□□□ 0.34
SCAMP4Q969E2 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC17.2■□□□□ 0.34
SCAMP4Q969E2 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC17.2■□□□□ 0.34
SCAMP4Q969E2 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC17.2■□□□□ 0.34
SCAMP4Q969E2 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC17.2■□□□□ 0.34
SCAMP4Q969E2 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
SCAMP4Q969E2 NME4-212ENST00000621774 904 ntTSL 3 BASIC17.2■□□□□ 0.34
SCAMP4Q969E2 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC17.2■□□□□ 0.34
SCAMP4Q969E2 AC117500.6-201ENST00000624871 588 ntBASIC17.2■□□□□ 0.34
SCAMP4Q969E2 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SCAMP4Q969E2 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC17.2■□□□□ 0.34
SCAMP4Q969E2 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC17.2■□□□□ 0.34
SCAMP4Q969E2 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SCAMP4Q969E2 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SCAMP4Q969E2 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SCAMP4Q969E2 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SCAMP4Q969E2 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SCAMP4Q969E2 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SCAMP4Q969E2 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC17.2■□□□□ 0.34
SCAMP4Q969E2 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC17.2■□□□□ 0.34
SCAMP4Q969E2 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC17.2■□□□□ 0.34
SCAMP4Q969E2 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC17.2■□□□□ 0.34
SCAMP4Q969E2 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms