Protein–RNA interactions for Protein: Q8WXH6

RAB40A, Ras-related protein Rab-40A, humanhuman

Predictions only

Length 277 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40AQ8WXH6 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
RAB40AQ8WXH6 AC116407.4-201ENST00000623319 1061 ntBASIC15.3■□□□□ 0.04
RAB40AQ8WXH6 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC15.3■□□□□ 0.04
RAB40AQ8WXH6 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
RAB40AQ8WXH6 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
RAB40AQ8WXH6 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
RAB40AQ8WXH6 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
RAB40AQ8WXH6 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RAB40AQ8WXH6 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC15.3■□□□□ 0.04
RAB40AQ8WXH6 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
RAB40AQ8WXH6 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RAB40AQ8WXH6 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RAB40AQ8WXH6 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
RAB40AQ8WXH6 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RAB40AQ8WXH6 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RAB40AQ8WXH6 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
RAB40AQ8WXH6 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
RAB40AQ8WXH6 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC15.29■□□□□ 0.04
RAB40AQ8WXH6 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RAB40AQ8WXH6 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
RAB40AQ8WXH6 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC15.29■□□□□ 0.04
RAB40AQ8WXH6 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC15.29■□□□□ 0.04
RAB40AQ8WXH6 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
RAB40AQ8WXH6 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RAB40AQ8WXH6 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC15.29■□□□□ 0.04
RAB40AQ8WXH6 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC15.29■□□□□ 0.04
RAB40AQ8WXH6 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RAB40AQ8WXH6 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RAB40AQ8WXH6 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
RAB40AQ8WXH6 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC15.29■□□□□ 0.04
RAB40AQ8WXH6 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
RAB40AQ8WXH6 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RAB40AQ8WXH6 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RAB40AQ8WXH6 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RAB40AQ8WXH6 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC15.29■□□□□ 0.04
RAB40AQ8WXH6 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC15.29■□□□□ 0.04
RAB40AQ8WXH6 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RAB40AQ8WXH6 PTK2-216ENST00000519881 863 ntTSL 3 BASIC15.29■□□□□ 0.04
RAB40AQ8WXH6 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC15.29■□□□□ 0.04
RAB40AQ8WXH6 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
RAB40AQ8WXH6 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
RAB40AQ8WXH6 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RAB40AQ8WXH6 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RAB40AQ8WXH6 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
RAB40AQ8WXH6 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RAB40AQ8WXH6 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
RAB40AQ8WXH6 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
RAB40AQ8WXH6 PCDH8P1-201ENST00000428983 2773 ntBASIC15.29■□□□□ 0.04
RAB40AQ8WXH6 AL162727.3-201ENST00000635661 2787 ntBASIC15.29■□□□□ 0.04
RAB40AQ8WXH6 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
RAB40AQ8WXH6 AC009949.1-201ENST00000623048 1830 ntBASIC15.29■□□□□ 0.04
RAB40AQ8WXH6 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RAB40AQ8WXH6 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
RAB40AQ8WXH6 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RAB40AQ8WXH6 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RAB40AQ8WXH6 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RAB40AQ8WXH6 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RAB40AQ8WXH6 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
RAB40AQ8WXH6 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RAB40AQ8WXH6 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RAB40AQ8WXH6 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RAB40AQ8WXH6 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RAB40AQ8WXH6 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RAB40AQ8WXH6 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RAB40AQ8WXH6 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC15.28■□□□□ 0.04
RAB40AQ8WXH6 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
RAB40AQ8WXH6 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC15.28■□□□□ 0.04
RAB40AQ8WXH6 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RAB40AQ8WXH6 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RAB40AQ8WXH6 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RAB40AQ8WXH6 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC15.28■□□□□ 0.04
RAB40AQ8WXH6 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC15.28■□□□□ 0.04
RAB40AQ8WXH6 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RAB40AQ8WXH6 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
RAB40AQ8WXH6 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RAB40AQ8WXH6 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RAB40AQ8WXH6 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
RAB40AQ8WXH6 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC15.28■□□□□ 0.04
RAB40AQ8WXH6 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
RAB40AQ8WXH6 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC15.28■□□□□ 0.04
RAB40AQ8WXH6 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC15.28■□□□□ 0.04
RAB40AQ8WXH6 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC15.28■□□□□ 0.04
RAB40AQ8WXH6 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC15.28■□□□□ 0.04
RAB40AQ8WXH6 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
RAB40AQ8WXH6 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
RAB40AQ8WXH6 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
RAB40AQ8WXH6 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
RAB40AQ8WXH6 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
RAB40AQ8WXH6 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC15.28■□□□□ 0.04
RAB40AQ8WXH6 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
RAB40AQ8WXH6 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RAB40AQ8WXH6 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RAB40AQ8WXH6 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RAB40AQ8WXH6 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
RAB40AQ8WXH6 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
RAB40AQ8WXH6 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
RAB40AQ8WXH6 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
RAB40AQ8WXH6 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.04
RAB40AQ8WXH6 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC15.27■□□□□ 0.04
RAB40AQ8WXH6 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC15.27■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 57.7 ms