Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NUP43Q8NFH3 FUOM-202ENST00000368551 628 ntTSL 3 BASIC16.26■□□□□ 0.19
NUP43Q8NFH3 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
NUP43Q8NFH3 THAP5-204ENST00000438865 868 ntTSL 2 BASIC16.26■□□□□ 0.19
NUP43Q8NFH3 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC16.26■□□□□ 0.19
NUP43Q8NFH3 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC16.26■□□□□ 0.19
NUP43Q8NFH3 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC16.26■□□□□ 0.19
NUP43Q8NFH3 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC16.26■□□□□ 0.19
NUP43Q8NFH3 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
NUP43Q8NFH3 PNN-202ENST00000553331 656 ntTSL 3 BASIC16.26■□□□□ 0.19
NUP43Q8NFH3 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC16.26■□□□□ 0.19
NUP43Q8NFH3 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC16.26■□□□□ 0.19
NUP43Q8NFH3 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
NUP43Q8NFH3 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
NUP43Q8NFH3 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NUP43Q8NFH3 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
NUP43Q8NFH3 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC16.26■□□□□ 0.19
NUP43Q8NFH3 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
NUP43Q8NFH3 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
NUP43Q8NFH3 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NUP43Q8NFH3 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
NUP43Q8NFH3 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
NUP43Q8NFH3 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NUP43Q8NFH3 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
NUP43Q8NFH3 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
NUP43Q8NFH3 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
NUP43Q8NFH3 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NUP43Q8NFH3 RHBDF1P1-201ENST00000427504 1941 ntBASIC16.25■□□□□ 0.19
NUP43Q8NFH3 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC16.25■□□□□ 0.19
NUP43Q8NFH3 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NUP43Q8NFH3 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
NUP43Q8NFH3 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
NUP43Q8NFH3 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
NUP43Q8NFH3 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
NUP43Q8NFH3 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
NUP43Q8NFH3 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC16.25■□□□□ 0.19
NUP43Q8NFH3 UPK3BP1-201ENST00000428678 509 ntBASIC16.25■□□□□ 0.19
NUP43Q8NFH3 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NUP43Q8NFH3 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC16.25■□□□□ 0.19
NUP43Q8NFH3 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC16.25■□□□□ 0.19
NUP43Q8NFH3 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC16.25■□□□□ 0.19
NUP43Q8NFH3 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
NUP43Q8NFH3 CCNC-219ENST00000627680 896 ntTSL 5 BASIC16.25■□□□□ 0.19
NUP43Q8NFH3 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
NUP43Q8NFH3 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC16.25■□□□□ 0.19
NUP43Q8NFH3 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
NUP43Q8NFH3 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC16.25■□□□□ 0.19
NUP43Q8NFH3 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NUP43Q8NFH3 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
NUP43Q8NFH3 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
NUP43Q8NFH3 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
NUP43Q8NFH3 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NUP43Q8NFH3 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
NUP43Q8NFH3 PCDHA12-202ENST00000613593 2588 ntBASIC16.25■□□□□ 0.19
NUP43Q8NFH3 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC16.24■□□□□ 0.19
NUP43Q8NFH3 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NUP43Q8NFH3 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NUP43Q8NFH3 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
NUP43Q8NFH3 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC16.24■□□□□ 0.19
NUP43Q8NFH3 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NUP43Q8NFH3 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
NUP43Q8NFH3 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
NUP43Q8NFH3 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NUP43Q8NFH3 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
NUP43Q8NFH3 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
NUP43Q8NFH3 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
NUP43Q8NFH3 SLC25A1P3-201ENST00000395415 828 ntBASIC16.24■□□□□ 0.19
NUP43Q8NFH3 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC16.24■□□□□ 0.19
NUP43Q8NFH3 NUS1P2-201ENST00000417358 873 ntBASIC16.24■□□□□ 0.19
NUP43Q8NFH3 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC16.24■□□□□ 0.19
NUP43Q8NFH3 SRP19-202ENST00000445150 833 ntTSL 2 BASIC16.24■□□□□ 0.19
NUP43Q8NFH3 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC16.24■□□□□ 0.19
NUP43Q8NFH3 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC16.24■□□□□ 0.19
NUP43Q8NFH3 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
NUP43Q8NFH3 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
NUP43Q8NFH3 AC022211.2-201ENST00000585075 2527 ntBASIC16.24■□□□□ 0.19
NUP43Q8NFH3 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NUP43Q8NFH3 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
NUP43Q8NFH3 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NUP43Q8NFH3 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
NUP43Q8NFH3 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
NUP43Q8NFH3 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
NUP43Q8NFH3 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
NUP43Q8NFH3 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NUP43Q8NFH3 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC16.24■□□□□ 0.19
NUP43Q8NFH3 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC16.24■□□□□ 0.19
NUP43Q8NFH3 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NUP43Q8NFH3 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC16.24■□□□□ 0.19
NUP43Q8NFH3 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
NUP43Q8NFH3 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
NUP43Q8NFH3 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
NUP43Q8NFH3 AD000864.1-201ENST00000624076 2295 ntBASIC16.24■□□□□ 0.19
NUP43Q8NFH3 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC16.24■□□□□ 0.19
NUP43Q8NFH3 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NUP43Q8NFH3 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
NUP43Q8NFH3 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC16.23■□□□□ 0.19
NUP43Q8NFH3 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
NUP43Q8NFH3 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
NUP43Q8NFH3 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
NUP43Q8NFH3 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC16.23■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms