Protein–RNA interactions for Protein: Q8NC56

LEMD2, LEM domain-containing protein 2, humanhuman

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD2Q8NC56 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
LEMD2Q8NC56 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LEMD2Q8NC56 AL133373.2-201ENST00000623187 2828 ntBASIC18.06■□□□□ 0.48
LEMD2Q8NC56 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LEMD2Q8NC56 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LEMD2Q8NC56 CNN2P11-201ENST00000429351 262 ntBASIC18.06■□□□□ 0.48
LEMD2Q8NC56 CEND1P1-201ENST00000451006 455 ntBASIC18.06■□□□□ 0.48
LEMD2Q8NC56 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LEMD2Q8NC56 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
LEMD2Q8NC56 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
LEMD2Q8NC56 AL355385.1-201ENST00000606123 409 ntBASIC18.06■□□□□ 0.48
LEMD2Q8NC56 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
LEMD2Q8NC56 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
LEMD2Q8NC56 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
LEMD2Q8NC56 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LEMD2Q8NC56 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LEMD2Q8NC56 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
LEMD2Q8NC56 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC18.05■□□□□ 0.48
LEMD2Q8NC56 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
LEMD2Q8NC56 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC18.05■□□□□ 0.48
LEMD2Q8NC56 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC18.05■□□□□ 0.48
LEMD2Q8NC56 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LEMD2Q8NC56 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC18.05■□□□□ 0.48
LEMD2Q8NC56 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC18.05■□□□□ 0.48
LEMD2Q8NC56 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
LEMD2Q8NC56 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
LEMD2Q8NC56 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LEMD2Q8NC56 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
LEMD2Q8NC56 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
LEMD2Q8NC56 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LEMD2Q8NC56 CD82-202ENST00000342935 967 ntTSL 5 BASIC18.05■□□□□ 0.48
LEMD2Q8NC56 NEK7-201ENST00000367383 586 ntTSL 2 BASIC18.05■□□□□ 0.48
LEMD2Q8NC56 DDT-204ENST00000404092 805 ntTSL 3 BASIC18.05■□□□□ 0.48
LEMD2Q8NC56 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC18.05■□□□□ 0.48
LEMD2Q8NC56 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
LEMD2Q8NC56 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
LEMD2Q8NC56 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
LEMD2Q8NC56 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LEMD2Q8NC56 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC18.05■□□□□ 0.48
LEMD2Q8NC56 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LEMD2Q8NC56 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
LEMD2Q8NC56 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
LEMD2Q8NC56 AC025580.3-201ENST00000617932 1424 ntBASIC18.05■□□□□ 0.48
LEMD2Q8NC56 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
LEMD2Q8NC56 AC138028.4-201ENST00000564984 1845 ntBASIC18.05■□□□□ 0.48
LEMD2Q8NC56 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LEMD2Q8NC56 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
LEMD2Q8NC56 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LEMD2Q8NC56 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC18.04■□□□□ 0.48
LEMD2Q8NC56 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
LEMD2Q8NC56 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LEMD2Q8NC56 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LEMD2Q8NC56 REM2-202ENST00000536884 1331 ntTSL 2 BASIC18.04■□□□□ 0.48
LEMD2Q8NC56 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LEMD2Q8NC56 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LEMD2Q8NC56 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
LEMD2Q8NC56 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LEMD2Q8NC56 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
LEMD2Q8NC56 AL135999.2-201ENST00000622438 1686 ntBASIC18.04■□□□□ 0.48
LEMD2Q8NC56 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
LEMD2Q8NC56 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LEMD2Q8NC56 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LEMD2Q8NC56 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LEMD2Q8NC56 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC18.04■□□□□ 0.48
LEMD2Q8NC56 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC18.04■□□□□ 0.48
LEMD2Q8NC56 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC18.04■□□□□ 0.48
LEMD2Q8NC56 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
LEMD2Q8NC56 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
LEMD2Q8NC56 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC18.04■□□□□ 0.48
LEMD2Q8NC56 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC18.04■□□□□ 0.48
LEMD2Q8NC56 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC18.04■□□□□ 0.48
LEMD2Q8NC56 AL139327.4-201ENST00000612362 153 ntBASIC18.04■□□□□ 0.48
LEMD2Q8NC56 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC18.04■□□□□ 0.48
LEMD2Q8NC56 WAC-202ENST00000347934 2839 ntTSL 5 BASIC18.04■□□□□ 0.48
LEMD2Q8NC56 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
LEMD2Q8NC56 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
LEMD2Q8NC56 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC18.04■□□□□ 0.48
LEMD2Q8NC56 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
LEMD2Q8NC56 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LEMD2Q8NC56 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC18.04■□□□□ 0.48
LEMD2Q8NC56 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC18.03■□□□□ 0.48
LEMD2Q8NC56 HLA-DQB1-201ENST00000374943 1656 ntBASIC18.03■□□□□ 0.48
LEMD2Q8NC56 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC18.03■□□□□ 0.48
LEMD2Q8NC56 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LEMD2Q8NC56 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
LEMD2Q8NC56 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC18.03■□□□□ 0.48
LEMD2Q8NC56 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
LEMD2Q8NC56 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LEMD2Q8NC56 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LEMD2Q8NC56 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC18.03■□□□□ 0.48
LEMD2Q8NC56 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC18.03■□□□□ 0.48
LEMD2Q8NC56 METTL21AP1-201ENST00000438852 635 ntBASIC18.03■□□□□ 0.48
LEMD2Q8NC56 FAM185BP-201ENST00000443595 716 ntBASIC18.03■□□□□ 0.48
LEMD2Q8NC56 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC18.03■□□□□ 0.48
LEMD2Q8NC56 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LEMD2Q8NC56 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC18.03■□□□□ 0.48
LEMD2Q8NC56 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
LEMD2Q8NC56 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LEMD2Q8NC56 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
LEMD2Q8NC56 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms