Protein–RNA interactions for Protein: Q8N9W5

DNAAF3, Dynein assembly factor 3, axonemal, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF3Q8N9W5 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC17.7■□□□□ 0.42
DNAAF3Q8N9W5 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC17.7■□□□□ 0.42
DNAAF3Q8N9W5 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
DNAAF3Q8N9W5 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
DNAAF3Q8N9W5 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
DNAAF3Q8N9W5 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC17.7■□□□□ 0.42
DNAAF3Q8N9W5 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
DNAAF3Q8N9W5 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
DNAAF3Q8N9W5 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC17.7■□□□□ 0.42
DNAAF3Q8N9W5 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC17.7■□□□□ 0.42
DNAAF3Q8N9W5 AC091607.1-201ENST00000490318 1060 ntBASIC17.7■□□□□ 0.42
DNAAF3Q8N9W5 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC17.7■□□□□ 0.42
DNAAF3Q8N9W5 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC17.7■□□□□ 0.42
DNAAF3Q8N9W5 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC17.7■□□□□ 0.42
DNAAF3Q8N9W5 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC17.7■□□□□ 0.42
DNAAF3Q8N9W5 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC17.7■□□□□ 0.42
DNAAF3Q8N9W5 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC17.7■□□□□ 0.42
DNAAF3Q8N9W5 RMI2-205ENST00000576027 818 ntTSL 2 BASIC17.7■□□□□ 0.42
DNAAF3Q8N9W5 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
DNAAF3Q8N9W5 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC17.7■□□□□ 0.42
DNAAF3Q8N9W5 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
DNAAF3Q8N9W5 AC009053.2-201ENST00000563701 2365 ntBASIC17.7■□□□□ 0.42
DNAAF3Q8N9W5 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC17.7■□□□□ 0.42
DNAAF3Q8N9W5 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
DNAAF3Q8N9W5 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC17.7■□□□□ 0.42
DNAAF3Q8N9W5 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
DNAAF3Q8N9W5 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC17.7■□□□□ 0.42
DNAAF3Q8N9W5 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
DNAAF3Q8N9W5 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
DNAAF3Q8N9W5 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
DNAAF3Q8N9W5 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
DNAAF3Q8N9W5 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
DNAAF3Q8N9W5 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC17.69■□□□□ 0.42
DNAAF3Q8N9W5 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
DNAAF3Q8N9W5 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC17.69■□□□□ 0.42
DNAAF3Q8N9W5 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC17.69■□□□□ 0.42
DNAAF3Q8N9W5 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC17.69■□□□□ 0.42
DNAAF3Q8N9W5 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC17.69■□□□□ 0.42
DNAAF3Q8N9W5 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
DNAAF3Q8N9W5 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
DNAAF3Q8N9W5 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
DNAAF3Q8N9W5 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC17.69■□□□□ 0.42
DNAAF3Q8N9W5 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
DNAAF3Q8N9W5 BET1L-202ENST00000332865 533 ntTSL 5 BASIC17.69■□□□□ 0.42
DNAAF3Q8N9W5 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
DNAAF3Q8N9W5 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC17.69■□□□□ 0.42
DNAAF3Q8N9W5 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC17.69■□□□□ 0.42
DNAAF3Q8N9W5 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC17.69■□□□□ 0.42
DNAAF3Q8N9W5 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
DNAAF3Q8N9W5 ISCU-203ENST00000431221 799 ntTSL 2 BASIC17.69■□□□□ 0.42
DNAAF3Q8N9W5 DANCR-204ENST00000444958 709 ntTSL 3 BASIC17.69■□□□□ 0.42
DNAAF3Q8N9W5 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC17.69■□□□□ 0.42
DNAAF3Q8N9W5 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
DNAAF3Q8N9W5 Z69720.1-201ENST00000601483 472 ntBASIC17.69■□□□□ 0.42
DNAAF3Q8N9W5 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
DNAAF3Q8N9W5 AL049757.1-201ENST00000616842 1596 ntBASIC17.69■□□□□ 0.42
DNAAF3Q8N9W5 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
DNAAF3Q8N9W5 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
DNAAF3Q8N9W5 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
DNAAF3Q8N9W5 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
DNAAF3Q8N9W5 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
DNAAF3Q8N9W5 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
DNAAF3Q8N9W5 FER1L4-210ENST00000615531 5998 ntBASIC17.69■□□□□ 0.42
DNAAF3Q8N9W5 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
DNAAF3Q8N9W5 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
DNAAF3Q8N9W5 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
DNAAF3Q8N9W5 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
DNAAF3Q8N9W5 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
DNAAF3Q8N9W5 AC233702.3-201ENST00000578656 1387 ntBASIC17.68■□□□□ 0.42
DNAAF3Q8N9W5 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC17.68■□□□□ 0.42
DNAAF3Q8N9W5 AC046185.3-201ENST00000623228 1824 ntBASIC17.68■□□□□ 0.42
DNAAF3Q8N9W5 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
DNAAF3Q8N9W5 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
DNAAF3Q8N9W5 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
DNAAF3Q8N9W5 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
DNAAF3Q8N9W5 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
DNAAF3Q8N9W5 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
DNAAF3Q8N9W5 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
DNAAF3Q8N9W5 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
DNAAF3Q8N9W5 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
DNAAF3Q8N9W5 MINOS1P3-201ENST00000457048 203 ntBASIC17.68■□□□□ 0.42
DNAAF3Q8N9W5 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC17.68■□□□□ 0.42
DNAAF3Q8N9W5 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC17.68■□□□□ 0.42
DNAAF3Q8N9W5 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
DNAAF3Q8N9W5 AP005901.3-202ENST00000581653 237 ntBASIC17.68■□□□□ 0.42
DNAAF3Q8N9W5 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
DNAAF3Q8N9W5 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
DNAAF3Q8N9W5 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC17.68■□□□□ 0.42
DNAAF3Q8N9W5 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
DNAAF3Q8N9W5 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
DNAAF3Q8N9W5 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
DNAAF3Q8N9W5 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
DNAAF3Q8N9W5 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
DNAAF3Q8N9W5 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC17.68■□□□□ 0.42
DNAAF3Q8N9W5 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC17.68■□□□□ 0.42
DNAAF3Q8N9W5 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC17.68■□□□□ 0.42
DNAAF3Q8N9W5 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
DNAAF3Q8N9W5 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC17.68■□□□□ 0.42
DNAAF3Q8N9W5 AC116353.5-201ENST00000638148 1699 ntBASIC17.67■□□□□ 0.42
DNAAF3Q8N9W5 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms