Protein–RNA interactions for Protein: Q8N4M1

SLC44A3, Choline transporter-like protein 3, humanhuman

Predictions only

Length 653 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A3Q8N4M1 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC17.68■□□□□ 0.42
SLC44A3Q8N4M1 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SLC44A3Q8N4M1 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
SLC44A3Q8N4M1 MCC-208ENST00000514701 2855 ntTSL 2 BASIC17.68■□□□□ 0.42
SLC44A3Q8N4M1 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
SLC44A3Q8N4M1 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SLC44A3Q8N4M1 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SLC44A3Q8N4M1 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SLC44A3Q8N4M1 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SLC44A3Q8N4M1 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SLC44A3Q8N4M1 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SLC44A3Q8N4M1 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC17.67■□□□□ 0.42
SLC44A3Q8N4M1 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
SLC44A3Q8N4M1 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SLC44A3Q8N4M1 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SLC44A3Q8N4M1 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SLC44A3Q8N4M1 MIR661-201ENST00000384842 89 ntBASIC17.67■□□□□ 0.42
SLC44A3Q8N4M1 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC17.67■□□□□ 0.42
SLC44A3Q8N4M1 CENPM-205ENST00000404067 905 ntTSL 3 BASIC17.67■□□□□ 0.42
SLC44A3Q8N4M1 GPS2P2-201ENST00000430745 888 ntBASIC17.67■□□□□ 0.42
SLC44A3Q8N4M1 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC17.67■□□□□ 0.42
SLC44A3Q8N4M1 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
SLC44A3Q8N4M1 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
SLC44A3Q8N4M1 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC17.67■□□□□ 0.42
SLC44A3Q8N4M1 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC17.67■□□□□ 0.42
SLC44A3Q8N4M1 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SLC44A3Q8N4M1 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC17.67■□□□□ 0.42
SLC44A3Q8N4M1 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC17.67■□□□□ 0.42
SLC44A3Q8N4M1 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC17.67■□□□□ 0.42
SLC44A3Q8N4M1 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC17.67■□□□□ 0.42
SLC44A3Q8N4M1 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SLC44A3Q8N4M1 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
SLC44A3Q8N4M1 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SLC44A3Q8N4M1 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC17.67■□□□□ 0.42
SLC44A3Q8N4M1 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
SLC44A3Q8N4M1 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SLC44A3Q8N4M1 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SLC44A3Q8N4M1 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
SLC44A3Q8N4M1 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SLC44A3Q8N4M1 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC17.67■□□□□ 0.42
SLC44A3Q8N4M1 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC17.67■□□□□ 0.42
SLC44A3Q8N4M1 AC135776.1-201ENST00000319817 2481 ntBASIC17.66■□□□□ 0.42
SLC44A3Q8N4M1 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC17.66■□□□□ 0.42
SLC44A3Q8N4M1 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SLC44A3Q8N4M1 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SLC44A3Q8N4M1 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SLC44A3Q8N4M1 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
SLC44A3Q8N4M1 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC17.66■□□□□ 0.42
SLC44A3Q8N4M1 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
SLC44A3Q8N4M1 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SLC44A3Q8N4M1 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SLC44A3Q8N4M1 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC17.66■□□□□ 0.42
SLC44A3Q8N4M1 GSAP-205ENST00000430584 600 ntTSL 5 BASIC17.66■□□□□ 0.42
SLC44A3Q8N4M1 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC17.66■□□□□ 0.42
SLC44A3Q8N4M1 UGT1A2P-201ENST00000454886 866 ntBASIC17.66■□□□□ 0.42
SLC44A3Q8N4M1 HLA-J-202ENST00000469281 1241 ntBASIC17.66■□□□□ 0.42
SLC44A3Q8N4M1 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
SLC44A3Q8N4M1 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC17.66■□□□□ 0.42
SLC44A3Q8N4M1 AC005225.4-201ENST00000557330 545 ntBASIC17.66■□□□□ 0.42
SLC44A3Q8N4M1 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC17.66■□□□□ 0.42
SLC44A3Q8N4M1 AC012645.4-201ENST00000610691 1061 ntBASIC17.66■□□□□ 0.42
SLC44A3Q8N4M1 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC17.66■□□□□ 0.42
SLC44A3Q8N4M1 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
SLC44A3Q8N4M1 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.66■□□□□ 0.42
SLC44A3Q8N4M1 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SLC44A3Q8N4M1 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
SLC44A3Q8N4M1 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SLC44A3Q8N4M1 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC17.66■□□□□ 0.42
SLC44A3Q8N4M1 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SLC44A3Q8N4M1 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SLC44A3Q8N4M1 HARS-203ENST00000431330 1774 ntTSL 2 BASIC17.66■□□□□ 0.42
SLC44A3Q8N4M1 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
SLC44A3Q8N4M1 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SLC44A3Q8N4M1 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC17.65■□□□□ 0.42
SLC44A3Q8N4M1 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SLC44A3Q8N4M1 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SLC44A3Q8N4M1 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC17.65■□□□□ 0.42
SLC44A3Q8N4M1 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SLC44A3Q8N4M1 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
SLC44A3Q8N4M1 VMA21-202ENST00000370361 693 ntTSL 5 BASIC17.65■□□□□ 0.42
SLC44A3Q8N4M1 GK-202ENST00000378941 458 ntTSL 3 BASIC17.65■□□□□ 0.42
SLC44A3Q8N4M1 AC107890.1-201ENST00000422478 521 ntBASIC17.65■□□□□ 0.42
SLC44A3Q8N4M1 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
SLC44A3Q8N4M1 RBPMS2P1-201ENST00000437762 623 ntBASIC17.65■□□□□ 0.42
SLC44A3Q8N4M1 DUX4L17-201ENST00000557360 1267 ntBASIC17.65■□□□□ 0.42
SLC44A3Q8N4M1 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
SLC44A3Q8N4M1 AL135744.1-201ENST00000565098 629 ntBASIC17.65■□□□□ 0.42
SLC44A3Q8N4M1 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC17.65■□□□□ 0.42
SLC44A3Q8N4M1 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC17.65■□□□□ 0.42
SLC44A3Q8N4M1 YTHDF3-AS1-201ENST00000603538 718 ntBASIC17.65■□□□□ 0.42
SLC44A3Q8N4M1 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC17.65■□□□□ 0.42
SLC44A3Q8N4M1 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SLC44A3Q8N4M1 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
SLC44A3Q8N4M1 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
SLC44A3Q8N4M1 AKAP8P1-201ENST00000434743 1349 ntBASIC17.65■□□□□ 0.42
SLC44A3Q8N4M1 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SLC44A3Q8N4M1 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC17.65■□□□□ 0.42
SLC44A3Q8N4M1 AMT-250ENST00000637682 1823 ntTSL 5 BASIC17.65■□□□□ 0.42
SLC44A3Q8N4M1 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC17.65■□□□□ 0.42
SLC44A3Q8N4M1 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 74.4 ms