Protein–RNA interactions for Protein: Q7Z5J4

RAI1, Retinoic acid-induced protein 1, humanhuman

Predicted RBP Predictions only

Length 1,906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI1Q7Z5J4 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
RAI1Q7Z5J4 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RAI1Q7Z5J4 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC14.72□□□□□ -0.05
RAI1Q7Z5J4 CALY-203ENST00000368558 825 ntTSL 5 BASIC14.72□□□□□ -0.05
RAI1Q7Z5J4 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC14.72□□□□□ -0.05
RAI1Q7Z5J4 CXCL1P1-201ENST00000502804 216 ntBASIC14.72□□□□□ -0.05
RAI1Q7Z5J4 AC109322.1-201ENST00000524499 1264 ntBASIC14.72□□□□□ -0.05
RAI1Q7Z5J4 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC14.72□□□□□ -0.05
RAI1Q7Z5J4 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC14.72□□□□□ -0.05
RAI1Q7Z5J4 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC14.72□□□□□ -0.05
RAI1Q7Z5J4 AC093028.1-201ENST00000622998 982 ntBASIC14.72□□□□□ -0.05
RAI1Q7Z5J4 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC14.72□□□□□ -0.05
RAI1Q7Z5J4 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
RAI1Q7Z5J4 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
RAI1Q7Z5J4 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC14.72□□□□□ -0.05
RAI1Q7Z5J4 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC14.72□□□□□ -0.05
RAI1Q7Z5J4 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC14.72□□□□□ -0.05
RAI1Q7Z5J4 AC025580.3-201ENST00000617932 1424 ntBASIC14.71□□□□□ -0.05
RAI1Q7Z5J4 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC14.71□□□□□ -0.05
RAI1Q7Z5J4 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC14.71□□□□□ -0.05
RAI1Q7Z5J4 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
RAI1Q7Z5J4 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
RAI1Q7Z5J4 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
RAI1Q7Z5J4 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
RAI1Q7Z5J4 AC092919.2-201ENST00000623631 1645 ntBASIC14.71□□□□□ -0.05
RAI1Q7Z5J4 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
RAI1Q7Z5J4 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
RAI1Q7Z5J4 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
RAI1Q7Z5J4 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
RAI1Q7Z5J4 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC14.71□□□□□ -0.05
RAI1Q7Z5J4 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
RAI1Q7Z5J4 AL513480.1-201ENST00000451731 511 ntBASIC14.71□□□□□ -0.05
RAI1Q7Z5J4 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
RAI1Q7Z5J4 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
RAI1Q7Z5J4 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
RAI1Q7Z5J4 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
RAI1Q7Z5J4 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
RAI1Q7Z5J4 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
RAI1Q7Z5J4 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC14.71□□□□□ -0.06
RAI1Q7Z5J4 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC14.71□□□□□ -0.06
RAI1Q7Z5J4 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
RAI1Q7Z5J4 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
RAI1Q7Z5J4 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
RAI1Q7Z5J4 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.06
RAI1Q7Z5J4 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
RAI1Q7Z5J4 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
RAI1Q7Z5J4 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RAI1Q7Z5J4 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC14.7□□□□□ -0.06
RAI1Q7Z5J4 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
RAI1Q7Z5J4 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RAI1Q7Z5J4 SLC25A6P5-201ENST00000435663 894 ntBASIC14.7□□□□□ -0.06
RAI1Q7Z5J4 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
RAI1Q7Z5J4 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
RAI1Q7Z5J4 LSM12-202ENST00000585388 942 ntTSL 3 BASIC14.7□□□□□ -0.06
RAI1Q7Z5J4 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC14.7□□□□□ -0.06
RAI1Q7Z5J4 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC14.7□□□□□ -0.06
RAI1Q7Z5J4 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
RAI1Q7Z5J4 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
RAI1Q7Z5J4 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
RAI1Q7Z5J4 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RAI1Q7Z5J4 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC14.7□□□□□ -0.06
RAI1Q7Z5J4 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RAI1Q7Z5J4 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC14.7□□□□□ -0.06
RAI1Q7Z5J4 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RAI1Q7Z5J4 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
RAI1Q7Z5J4 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
RAI1Q7Z5J4 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
RAI1Q7Z5J4 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RAI1Q7Z5J4 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC14.7□□□□□ -0.06
RAI1Q7Z5J4 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RAI1Q7Z5J4 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
RAI1Q7Z5J4 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
RAI1Q7Z5J4 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RAI1Q7Z5J4 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
RAI1Q7Z5J4 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC14.7□□□□□ -0.06
RAI1Q7Z5J4 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC14.7□□□□□ -0.06
RAI1Q7Z5J4 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RAI1Q7Z5J4 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
RAI1Q7Z5J4 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC14.7□□□□□ -0.06
RAI1Q7Z5J4 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC14.7□□□□□ -0.06
RAI1Q7Z5J4 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
RAI1Q7Z5J4 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC14.7□□□□□ -0.06
RAI1Q7Z5J4 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC14.7□□□□□ -0.06
RAI1Q7Z5J4 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC14.7□□□□□ -0.06
RAI1Q7Z5J4 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC14.7□□□□□ -0.06
RAI1Q7Z5J4 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC14.7□□□□□ -0.06
RAI1Q7Z5J4 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC14.7□□□□□ -0.06
RAI1Q7Z5J4 LYSMD4-203ENST00000378904 2122 ntBASIC14.7□□□□□ -0.06
RAI1Q7Z5J4 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RAI1Q7Z5J4 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RAI1Q7Z5J4 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
RAI1Q7Z5J4 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RAI1Q7Z5J4 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC14.7□□□□□ -0.06
RAI1Q7Z5J4 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
RAI1Q7Z5J4 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RAI1Q7Z5J4 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RAI1Q7Z5J4 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC14.69□□□□□ -0.06
RAI1Q7Z5J4 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RAI1Q7Z5J4 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RAI1Q7Z5J4 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 126.7 ms