Protein–RNA interactions for Protein: Q7RTM1

OTOP1, Otopetrin-1, humanhuman

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OTOP1Q7RTM1 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
OTOP1Q7RTM1 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
OTOP1Q7RTM1 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.79
OTOP1Q7RTM1 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
OTOP1Q7RTM1 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC20.01■□□□□ 0.79
OTOP1Q7RTM1 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC20.01■□□□□ 0.79
OTOP1Q7RTM1 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC20.01■□□□□ 0.79
OTOP1Q7RTM1 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
OTOP1Q7RTM1 AC003669.1-201ENST00000334569 611 ntBASIC20.01■□□□□ 0.79
OTOP1Q7RTM1 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC20.01■□□□□ 0.79
OTOP1Q7RTM1 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
OTOP1Q7RTM1 COX5BP2-201ENST00000392354 334 ntBASIC20.01■□□□□ 0.79
OTOP1Q7RTM1 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
OTOP1Q7RTM1 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
OTOP1Q7RTM1 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
OTOP1Q7RTM1 IGHV3OR16-6-201ENST00000568775 360 ntBASIC20.01■□□□□ 0.79
OTOP1Q7RTM1 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC20.01■□□□□ 0.79
OTOP1Q7RTM1 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC20.01■□□□□ 0.79
OTOP1Q7RTM1 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC20.01■□□□□ 0.79
OTOP1Q7RTM1 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
OTOP1Q7RTM1 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
OTOP1Q7RTM1 AC092919.2-201ENST00000623631 1645 ntBASIC20.01■□□□□ 0.79
OTOP1Q7RTM1 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
OTOP1Q7RTM1 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC20.01■□□□□ 0.79
OTOP1Q7RTM1 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC20■□□□□ 0.79
OTOP1Q7RTM1 AC006116.8-202ENST00000587620 1550 ntBASIC20■□□□□ 0.79
OTOP1Q7RTM1 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC20■□□□□ 0.79
OTOP1Q7RTM1 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC20■□□□□ 0.79
OTOP1Q7RTM1 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
OTOP1Q7RTM1 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
OTOP1Q7RTM1 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
OTOP1Q7RTM1 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC20■□□□□ 0.79
OTOP1Q7RTM1 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
OTOP1Q7RTM1 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
OTOP1Q7RTM1 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC20■□□□□ 0.79
OTOP1Q7RTM1 KLF4P1-201ENST00000412782 1185 ntBASIC20■□□□□ 0.79
OTOP1Q7RTM1 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC20■□□□□ 0.79
OTOP1Q7RTM1 FAM207CP-201ENST00000443486 507 ntBASIC20■□□□□ 0.79
OTOP1Q7RTM1 TIMM8BP1-201ENST00000452384 211 ntBASIC20■□□□□ 0.79
OTOP1Q7RTM1 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC20■□□□□ 0.79
OTOP1Q7RTM1 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC20■□□□□ 0.79
OTOP1Q7RTM1 LINC02560-201ENST00000596379 459 ntBASIC20■□□□□ 0.79
OTOP1Q7RTM1 AL359881.2-201ENST00000602973 570 ntBASIC20■□□□□ 0.79
OTOP1Q7RTM1 AC116407.2-201ENST00000613639 860 ntBASIC20■□□□□ 0.79
OTOP1Q7RTM1 AC008761.3-201ENST00000624803 892 ntBASIC20■□□□□ 0.79
OTOP1Q7RTM1 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC20■□□□□ 0.79
OTOP1Q7RTM1 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
OTOP1Q7RTM1 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC20■□□□□ 0.79
OTOP1Q7RTM1 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
OTOP1Q7RTM1 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC20■□□□□ 0.79
OTOP1Q7RTM1 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
OTOP1Q7RTM1 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
OTOP1Q7RTM1 AL049757.1-201ENST00000616842 1596 ntBASIC20■□□□□ 0.79
OTOP1Q7RTM1 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
OTOP1Q7RTM1 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
OTOP1Q7RTM1 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
OTOP1Q7RTM1 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
OTOP1Q7RTM1 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
OTOP1Q7RTM1 NOC2LP1-202ENST00000452600 2235 ntBASIC19.99■□□□□ 0.79
OTOP1Q7RTM1 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
OTOP1Q7RTM1 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
OTOP1Q7RTM1 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
OTOP1Q7RTM1 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
OTOP1Q7RTM1 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
OTOP1Q7RTM1 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
OTOP1Q7RTM1 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
OTOP1Q7RTM1 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
OTOP1Q7RTM1 GRAP-202ENST00000395635 834 ntTSL 2 BASIC19.99■□□□□ 0.79
OTOP1Q7RTM1 MIR943-201ENST00000401286 94 ntBASIC19.99■□□□□ 0.79
OTOP1Q7RTM1 CENPM-205ENST00000404067 905 ntTSL 3 BASIC19.99■□□□□ 0.79
OTOP1Q7RTM1 CXCL1P1-201ENST00000502804 216 ntBASIC19.99■□□□□ 0.79
OTOP1Q7RTM1 GATB-205ENST00000508611 605 ntTSL 2 BASIC19.99■□□□□ 0.79
OTOP1Q7RTM1 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
OTOP1Q7RTM1 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC19.99■□□□□ 0.79
OTOP1Q7RTM1 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC19.99■□□□□ 0.79
OTOP1Q7RTM1 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC19.99■□□□□ 0.79
OTOP1Q7RTM1 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC19.99■□□□□ 0.79
OTOP1Q7RTM1 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
OTOP1Q7RTM1 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
OTOP1Q7RTM1 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
OTOP1Q7RTM1 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
OTOP1Q7RTM1 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
OTOP1Q7RTM1 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
OTOP1Q7RTM1 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
OTOP1Q7RTM1 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
OTOP1Q7RTM1 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
OTOP1Q7RTM1 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
OTOP1Q7RTM1 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC19.98■□□□□ 0.79
OTOP1Q7RTM1 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
OTOP1Q7RTM1 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
OTOP1Q7RTM1 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC19.98■□□□□ 0.79
OTOP1Q7RTM1 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC19.98■□□□□ 0.79
OTOP1Q7RTM1 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC19.98■□□□□ 0.79
OTOP1Q7RTM1 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
OTOP1Q7RTM1 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC19.98■□□□□ 0.79
OTOP1Q7RTM1 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC19.98■□□□□ 0.79
OTOP1Q7RTM1 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC19.98■□□□□ 0.79
OTOP1Q7RTM1 SERF2-217ENST00000630046 862 ntTSL 5 BASIC19.98■□□□□ 0.79
OTOP1Q7RTM1 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
OTOP1Q7RTM1 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC19.98■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 73 ms