Protein–RNA interactions for Protein: Q7LBR1

CHMP1B, Charged multivesicular body protein 1b, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1BQ7LBR1 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC16.06■□□□□ 0.16
CHMP1BQ7LBR1 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CHMP1BQ7LBR1 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CHMP1BQ7LBR1 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC16.06■□□□□ 0.16
CHMP1BQ7LBR1 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CHMP1BQ7LBR1 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
CHMP1BQ7LBR1 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CHMP1BQ7LBR1 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
CHMP1BQ7LBR1 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CHMP1BQ7LBR1 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CHMP1BQ7LBR1 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC16.06■□□□□ 0.16
CHMP1BQ7LBR1 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CHMP1BQ7LBR1 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
CHMP1BQ7LBR1 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
CHMP1BQ7LBR1 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CHMP1BQ7LBR1 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC16.06■□□□□ 0.16
CHMP1BQ7LBR1 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CHMP1BQ7LBR1 CDV3-207ENST00000508481 661 ntTSL 3 BASIC16.06■□□□□ 0.16
CHMP1BQ7LBR1 FICD-205ENST00000552758 603 ntTSL 2 BASIC16.06■□□□□ 0.16
CHMP1BQ7LBR1 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC16.06■□□□□ 0.16
CHMP1BQ7LBR1 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CHMP1BQ7LBR1 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
CHMP1BQ7LBR1 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
CHMP1BQ7LBR1 AL732292.2-201ENST00000609649 430 ntBASIC16.06■□□□□ 0.16
CHMP1BQ7LBR1 AL353801.3-201ENST00000609898 542 ntBASIC16.06■□□□□ 0.16
CHMP1BQ7LBR1 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
CHMP1BQ7LBR1 CCNC-219ENST00000627680 896 ntTSL 5 BASIC16.06■□□□□ 0.16
CHMP1BQ7LBR1 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC16.06■□□□□ 0.16
CHMP1BQ7LBR1 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CHMP1BQ7LBR1 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CHMP1BQ7LBR1 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CHMP1BQ7LBR1 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CHMP1BQ7LBR1 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
CHMP1BQ7LBR1 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
CHMP1BQ7LBR1 AL096828.2-201ENST00000567259 1965 ntBASIC16.06■□□□□ 0.16
CHMP1BQ7LBR1 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
CHMP1BQ7LBR1 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
CHMP1BQ7LBR1 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CHMP1BQ7LBR1 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CHMP1BQ7LBR1 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC16.05■□□□□ 0.16
CHMP1BQ7LBR1 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC16.05■□□□□ 0.16
CHMP1BQ7LBR1 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CHMP1BQ7LBR1 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CHMP1BQ7LBR1 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC16.05■□□□□ 0.16
CHMP1BQ7LBR1 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
CHMP1BQ7LBR1 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CHMP1BQ7LBR1 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CHMP1BQ7LBR1 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CHMP1BQ7LBR1 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
CHMP1BQ7LBR1 DFFB-203ENST00000341385 572 ntTSL 5 BASIC16.05■□□□□ 0.16
CHMP1BQ7LBR1 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC16.05■□□□□ 0.16
CHMP1BQ7LBR1 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CHMP1BQ7LBR1 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
CHMP1BQ7LBR1 FAAHP1-202ENST00000446499 1238 ntBASIC16.05■□□□□ 0.16
CHMP1BQ7LBR1 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC16.05■□□□□ 0.16
CHMP1BQ7LBR1 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC16.05■□□□□ 0.16
CHMP1BQ7LBR1 AC091607.1-201ENST00000490318 1060 ntBASIC16.05■□□□□ 0.16
CHMP1BQ7LBR1 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC16.05■□□□□ 0.16
CHMP1BQ7LBR1 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC16.05■□□□□ 0.16
CHMP1BQ7LBR1 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CHMP1BQ7LBR1 RN7SL510P-201ENST00000581311 263 ntBASIC16.05■□□□□ 0.16
CHMP1BQ7LBR1 AP005901.3-202ENST00000581653 237 ntBASIC16.05■□□□□ 0.16
CHMP1BQ7LBR1 AC116407.2-201ENST00000613639 860 ntBASIC16.05■□□□□ 0.16
CHMP1BQ7LBR1 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CHMP1BQ7LBR1 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
CHMP1BQ7LBR1 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC16.05■□□□□ 0.16
CHMP1BQ7LBR1 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CHMP1BQ7LBR1 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CHMP1BQ7LBR1 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC16.05■□□□□ 0.16
CHMP1BQ7LBR1 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CHMP1BQ7LBR1 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CHMP1BQ7LBR1 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CHMP1BQ7LBR1 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC16.05■□□□□ 0.16
CHMP1BQ7LBR1 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC16.05■□□□□ 0.16
CHMP1BQ7LBR1 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CHMP1BQ7LBR1 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
CHMP1BQ7LBR1 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CHMP1BQ7LBR1 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC16.05■□□□□ 0.16
CHMP1BQ7LBR1 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CHMP1BQ7LBR1 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CHMP1BQ7LBR1 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC16.04■□□□□ 0.16
CHMP1BQ7LBR1 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CHMP1BQ7LBR1 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CHMP1BQ7LBR1 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CHMP1BQ7LBR1 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CHMP1BQ7LBR1 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
CHMP1BQ7LBR1 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CHMP1BQ7LBR1 AC018695.7-201ENST00000624587 2492 ntBASIC16.04■□□□□ 0.16
CHMP1BQ7LBR1 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CHMP1BQ7LBR1 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
CHMP1BQ7LBR1 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CHMP1BQ7LBR1 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC16.04■□□□□ 0.16
CHMP1BQ7LBR1 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
CHMP1BQ7LBR1 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CHMP1BQ7LBR1 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CHMP1BQ7LBR1 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CHMP1BQ7LBR1 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CHMP1BQ7LBR1 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CHMP1BQ7LBR1 AL845331.1-201ENST00000424978 1190 ntBASIC16.04■□□□□ 0.16
CHMP1BQ7LBR1 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms