Protein–RNA interactions for Protein: Q7L0R7

RNF44, RING finger protein 44, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF44Q7L0R7 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RNF44Q7L0R7 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RNF44Q7L0R7 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
RNF44Q7L0R7 AL031284.1-201ENST00000419297 478 ntBASIC16.66■□□□□ 0.26
RNF44Q7L0R7 LAGE3P1-201ENST00000425356 484 ntBASIC16.66■□□□□ 0.26
RNF44Q7L0R7 RPS2P1-201ENST00000434010 821 ntBASIC16.66■□□□□ 0.26
RNF44Q7L0R7 HNRNPDP1-201ENST00000439535 754 ntBASIC16.66■□□□□ 0.26
RNF44Q7L0R7 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC16.66■□□□□ 0.26
RNF44Q7L0R7 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
RNF44Q7L0R7 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC16.66■□□□□ 0.26
RNF44Q7L0R7 CYB561-217ENST00000582997 877 ntTSL 5 BASIC16.66■□□□□ 0.26
RNF44Q7L0R7 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RNF44Q7L0R7 MIR7706-201ENST00000613747 67 ntBASIC16.66■□□□□ 0.26
RNF44Q7L0R7 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC16.66■□□□□ 0.26
RNF44Q7L0R7 AC107918.4-202ENST00000641623 219 ntBASIC16.66■□□□□ 0.26
RNF44Q7L0R7 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
RNF44Q7L0R7 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
RNF44Q7L0R7 AL133373.2-201ENST00000623187 2828 ntBASIC16.66■□□□□ 0.26
RNF44Q7L0R7 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
RNF44Q7L0R7 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RNF44Q7L0R7 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RNF44Q7L0R7 AC005332.8-201ENST00000622750 2735 ntBASIC16.66■□□□□ 0.26
RNF44Q7L0R7 HLA-A-201ENST00000376802 1334 ntBASIC16.66■□□□□ 0.26
RNF44Q7L0R7 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RNF44Q7L0R7 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RNF44Q7L0R7 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
RNF44Q7L0R7 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
RNF44Q7L0R7 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC16.65■□□□□ 0.26
RNF44Q7L0R7 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RNF44Q7L0R7 GID4-202ENST00000376345 1391 ntTSL 3 BASIC16.65■□□□□ 0.26
RNF44Q7L0R7 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
RNF44Q7L0R7 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC16.65■□□□□ 0.26
RNF44Q7L0R7 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
RNF44Q7L0R7 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RNF44Q7L0R7 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC16.65■□□□□ 0.26
RNF44Q7L0R7 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RNF44Q7L0R7 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RNF44Q7L0R7 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RNF44Q7L0R7 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC16.65■□□□□ 0.26
RNF44Q7L0R7 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RNF44Q7L0R7 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
RNF44Q7L0R7 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC16.65■□□□□ 0.26
RNF44Q7L0R7 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RNF44Q7L0R7 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC16.65■□□□□ 0.26
RNF44Q7L0R7 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RNF44Q7L0R7 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC16.65■□□□□ 0.26
RNF44Q7L0R7 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
RNF44Q7L0R7 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC16.65■□□□□ 0.26
RNF44Q7L0R7 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RNF44Q7L0R7 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC16.65■□□□□ 0.26
RNF44Q7L0R7 PENK-208ENST00000523051 772 ntTSL 5 BASIC16.65■□□□□ 0.26
RNF44Q7L0R7 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC16.65■□□□□ 0.26
RNF44Q7L0R7 OR7E14P-202ENST00000530490 1290 ntBASIC16.65■□□□□ 0.26
RNF44Q7L0R7 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC16.65■□□□□ 0.26
RNF44Q7L0R7 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC16.65■□□□□ 0.26
RNF44Q7L0R7 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC16.65■□□□□ 0.26
RNF44Q7L0R7 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
RNF44Q7L0R7 AP001005.1-201ENST00000571755 1248 ntBASIC16.65■□□□□ 0.26
RNF44Q7L0R7 FAM215A-202ENST00000632077 792 ntBASIC16.65■□□□□ 0.26
RNF44Q7L0R7 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RNF44Q7L0R7 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC16.65■□□□□ 0.26
RNF44Q7L0R7 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RNF44Q7L0R7 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RNF44Q7L0R7 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC16.65■□□□□ 0.26
RNF44Q7L0R7 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC16.65■□□□□ 0.26
RNF44Q7L0R7 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
RNF44Q7L0R7 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
RNF44Q7L0R7 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RNF44Q7L0R7 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RNF44Q7L0R7 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
RNF44Q7L0R7 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
RNF44Q7L0R7 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC16.65■□□□□ 0.26
RNF44Q7L0R7 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC16.64■□□□□ 0.26
RNF44Q7L0R7 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RNF44Q7L0R7 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC16.64■□□□□ 0.25
RNF44Q7L0R7 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RNF44Q7L0R7 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
RNF44Q7L0R7 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
RNF44Q7L0R7 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
RNF44Q7L0R7 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
RNF44Q7L0R7 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
RNF44Q7L0R7 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RNF44Q7L0R7 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC16.64■□□□□ 0.25
RNF44Q7L0R7 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
RNF44Q7L0R7 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RNF44Q7L0R7 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC16.64■□□□□ 0.25
RNF44Q7L0R7 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RNF44Q7L0R7 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
RNF44Q7L0R7 CYGB-205ENST00000590175 830 ntTSL 3 BASIC16.64■□□□□ 0.25
RNF44Q7L0R7 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC16.64■□□□□ 0.25
RNF44Q7L0R7 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RNF44Q7L0R7 AL589182.2-201ENST00000619332 1049 ntBASIC16.64■□□□□ 0.25
RNF44Q7L0R7 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC16.64■□□□□ 0.25
RNF44Q7L0R7 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RNF44Q7L0R7 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
RNF44Q7L0R7 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RNF44Q7L0R7 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RNF44Q7L0R7 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC16.64■□□□□ 0.25
RNF44Q7L0R7 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RNF44Q7L0R7 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms