Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
FOXR1Q6PIV2 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC18.15■□□□□ 0.5
FOXR1Q6PIV2 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
FOXR1Q6PIV2 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC18.15■□□□□ 0.5
FOXR1Q6PIV2 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
FOXR1Q6PIV2 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
FOXR1Q6PIV2 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
FOXR1Q6PIV2 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
FOXR1Q6PIV2 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
FOXR1Q6PIV2 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
FOXR1Q6PIV2 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
FOXR1Q6PIV2 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC18.15■□□□□ 0.5
FOXR1Q6PIV2 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC18.15■□□□□ 0.5
FOXR1Q6PIV2 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC18.15■□□□□ 0.5
FOXR1Q6PIV2 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC18.15■□□□□ 0.5
FOXR1Q6PIV2 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
FOXR1Q6PIV2 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
FOXR1Q6PIV2 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
FOXR1Q6PIV2 MBP-202ENST00000355994 2772 ntTSL 5 BASIC18.15■□□□□ 0.5
FOXR1Q6PIV2 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC18.15■□□□□ 0.5
FOXR1Q6PIV2 TBC1D3P2-202ENST00000577902 1649 ntBASIC18.15■□□□□ 0.5
FOXR1Q6PIV2 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
FOXR1Q6PIV2 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC18.15■□□□□ 0.5
FOXR1Q6PIV2 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
FOXR1Q6PIV2 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
FOXR1Q6PIV2 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC18.15■□□□□ 0.5
FOXR1Q6PIV2 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC18.14■□□□□ 0.5
FOXR1Q6PIV2 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.5
FOXR1Q6PIV2 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
FOXR1Q6PIV2 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC18.14■□□□□ 0.5
FOXR1Q6PIV2 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
FOXR1Q6PIV2 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
FOXR1Q6PIV2 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
FOXR1Q6PIV2 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC18.14■□□□□ 0.49
FOXR1Q6PIV2 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
FOXR1Q6PIV2 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
FOXR1Q6PIV2 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC18.14■□□□□ 0.49
FOXR1Q6PIV2 PRELID1P1-202ENST00000567272 903 ntBASIC18.14■□□□□ 0.49
FOXR1Q6PIV2 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC18.14■□□□□ 0.49
FOXR1Q6PIV2 MIR4674-201ENST00000582457 87 ntBASIC18.14■□□□□ 0.49
FOXR1Q6PIV2 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC18.14■□□□□ 0.49
FOXR1Q6PIV2 HYMAI.1-201ENST00000620949 238 ntBASIC18.14■□□□□ 0.49
FOXR1Q6PIV2 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
FOXR1Q6PIV2 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC18.14■□□□□ 0.49
FOXR1Q6PIV2 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
FOXR1Q6PIV2 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
FOXR1Q6PIV2 AL662844.4-201ENST00000606367 2838 ntBASIC18.14■□□□□ 0.49
FOXR1Q6PIV2 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
FOXR1Q6PIV2 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
FOXR1Q6PIV2 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
FOXR1Q6PIV2 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC18.14■□□□□ 0.49
FOXR1Q6PIV2 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC18.14■□□□□ 0.49
FOXR1Q6PIV2 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
FOXR1Q6PIV2 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC18.13■□□□□ 0.49
FOXR1Q6PIV2 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
FOXR1Q6PIV2 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
FOXR1Q6PIV2 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
FOXR1Q6PIV2 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC18.13■□□□□ 0.49
FOXR1Q6PIV2 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
FOXR1Q6PIV2 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
FOXR1Q6PIV2 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
FOXR1Q6PIV2 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
FOXR1Q6PIV2 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC18.13■□□□□ 0.49
FOXR1Q6PIV2 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC18.13■□□□□ 0.49
FOXR1Q6PIV2 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
FOXR1Q6PIV2 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
FOXR1Q6PIV2 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC18.13■□□□□ 0.49
FOXR1Q6PIV2 TSPY21P-201ENST00000433481 731 ntBASIC18.13■□□□□ 0.49
FOXR1Q6PIV2 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC18.13■□□□□ 0.49
FOXR1Q6PIV2 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC18.13■□□□□ 0.49
FOXR1Q6PIV2 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC18.13■□□□□ 0.49
FOXR1Q6PIV2 CR769767.2-201ENST00000622735 460 ntBASIC18.13■□□□□ 0.49
FOXR1Q6PIV2 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
FOXR1Q6PIV2 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC18.13■□□□□ 0.49
FOXR1Q6PIV2 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
FOXR1Q6PIV2 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC18.13■□□□□ 0.49
FOXR1Q6PIV2 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
FOXR1Q6PIV2 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC18.13■□□□□ 0.49
FOXR1Q6PIV2 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
FOXR1Q6PIV2 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
FOXR1Q6PIV2 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC18.13■□□□□ 0.49
FOXR1Q6PIV2 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
FOXR1Q6PIV2 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
FOXR1Q6PIV2 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
FOXR1Q6PIV2 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
FOXR1Q6PIV2 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
FOXR1Q6PIV2 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
FOXR1Q6PIV2 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
FOXR1Q6PIV2 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
FOXR1Q6PIV2 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
FOXR1Q6PIV2 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
FOXR1Q6PIV2 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
FOXR1Q6PIV2 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
FOXR1Q6PIV2 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
FOXR1Q6PIV2 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
FOXR1Q6PIV2 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
FOXR1Q6PIV2 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
FOXR1Q6PIV2 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
FOXR1Q6PIV2 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
FOXR1Q6PIV2 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms