Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TMEM53Q6P2H8 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC15.98■□□□□ 0.15
TMEM53Q6P2H8 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC15.98■□□□□ 0.15
TMEM53Q6P2H8 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
TMEM53Q6P2H8 AC063952.2-201ENST00000498792 1227 ntBASIC15.98■□□□□ 0.15
TMEM53Q6P2H8 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
TMEM53Q6P2H8 AC022616.7-201ENST00000525383 220 ntBASIC15.98■□□□□ 0.15
TMEM53Q6P2H8 AL049597.2-201ENST00000565575 961 ntBASIC15.98■□□□□ 0.15
TMEM53Q6P2H8 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
TMEM53Q6P2H8 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC15.98■□□□□ 0.15
TMEM53Q6P2H8 USF2-205ENST00000594064 1179 ntTSL 2 BASIC15.98■□□□□ 0.15
TMEM53Q6P2H8 AL136038.4-201ENST00000603606 1261 ntBASIC15.98■□□□□ 0.15
TMEM53Q6P2H8 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
TMEM53Q6P2H8 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
TMEM53Q6P2H8 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC15.98■□□□□ 0.15
TMEM53Q6P2H8 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
TMEM53Q6P2H8 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
TMEM53Q6P2H8 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TMEM53Q6P2H8 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TMEM53Q6P2H8 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC15.98■□□□□ 0.15
TMEM53Q6P2H8 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
TMEM53Q6P2H8 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
TMEM53Q6P2H8 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TMEM53Q6P2H8 AC007950.2-201ENST00000615045 2347 ntBASIC15.97■□□□□ 0.15
TMEM53Q6P2H8 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TMEM53Q6P2H8 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC15.97■□□□□ 0.15
TMEM53Q6P2H8 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC15.97■□□□□ 0.15
TMEM53Q6P2H8 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC15.97■□□□□ 0.15
TMEM53Q6P2H8 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TMEM53Q6P2H8 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TMEM53Q6P2H8 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TMEM53Q6P2H8 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
TMEM53Q6P2H8 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TMEM53Q6P2H8 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
TMEM53Q6P2H8 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TMEM53Q6P2H8 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TMEM53Q6P2H8 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TMEM53Q6P2H8 SPDYE15P-201ENST00000424157 909 ntBASIC15.97■□□□□ 0.15
TMEM53Q6P2H8 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC15.97■□□□□ 0.15
TMEM53Q6P2H8 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC15.97■□□□□ 0.15
TMEM53Q6P2H8 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
TMEM53Q6P2H8 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TMEM53Q6P2H8 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TMEM53Q6P2H8 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TMEM53Q6P2H8 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TMEM53Q6P2H8 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
TMEM53Q6P2H8 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TMEM53Q6P2H8 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TMEM53Q6P2H8 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC15.97■□□□□ 0.15
TMEM53Q6P2H8 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
TMEM53Q6P2H8 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TMEM53Q6P2H8 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
TMEM53Q6P2H8 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TMEM53Q6P2H8 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TMEM53Q6P2H8 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TMEM53Q6P2H8 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC15.96■□□□□ 0.15
TMEM53Q6P2H8 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC15.96■□□□□ 0.15
TMEM53Q6P2H8 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TMEM53Q6P2H8 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TMEM53Q6P2H8 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
TMEM53Q6P2H8 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC15.96■□□□□ 0.15
TMEM53Q6P2H8 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC15.96■□□□□ 0.15
TMEM53Q6P2H8 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
TMEM53Q6P2H8 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
TMEM53Q6P2H8 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC15.96■□□□□ 0.15
TMEM53Q6P2H8 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TMEM53Q6P2H8 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
TMEM53Q6P2H8 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC15.96■□□□□ 0.15
TMEM53Q6P2H8 SLC25A6P5-201ENST00000435663 894 ntBASIC15.96■□□□□ 0.15
TMEM53Q6P2H8 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
TMEM53Q6P2H8 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TMEM53Q6P2H8 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC15.96■□□□□ 0.15
TMEM53Q6P2H8 LTBR-211ENST00000543190 785 ntTSL 3 BASIC15.96■□□□□ 0.15
TMEM53Q6P2H8 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TMEM53Q6P2H8 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
TMEM53Q6P2H8 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TMEM53Q6P2H8 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TMEM53Q6P2H8 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TMEM53Q6P2H8 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
TMEM53Q6P2H8 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
TMEM53Q6P2H8 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC15.96■□□□□ 0.15
TMEM53Q6P2H8 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
TMEM53Q6P2H8 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
TMEM53Q6P2H8 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
TMEM53Q6P2H8 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.14
TMEM53Q6P2H8 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC15.96■□□□□ 0.14
TMEM53Q6P2H8 BANP-204ENST00000393208 2283 ntTSL 2 BASIC15.96■□□□□ 0.14
TMEM53Q6P2H8 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.14
TMEM53Q6P2H8 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
TMEM53Q6P2H8 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TMEM53Q6P2H8 AL391807.1-203ENST00000604392 2365 ntBASIC15.95■□□□□ 0.14
TMEM53Q6P2H8 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TMEM53Q6P2H8 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TMEM53Q6P2H8 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
TMEM53Q6P2H8 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
TMEM53Q6P2H8 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC15.95■□□□□ 0.14
TMEM53Q6P2H8 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
TMEM53Q6P2H8 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TMEM53Q6P2H8 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
TMEM53Q6P2H8 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms