Protein–RNA interactions for Protein: Q6P161

MRPL54, 39S ribosomal protein L54, mitochondrial, humanhuman

Known RBP Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL54Q6P161 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
MRPL54Q6P161 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
MRPL54Q6P161 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
MRPL54Q6P161 AC046185.3-201ENST00000623228 1824 ntBASIC13.16□□□□□ -0.3
MRPL54Q6P161 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
MRPL54Q6P161 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
MRPL54Q6P161 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
MRPL54Q6P161 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC13.15□□□□□ -0.3
MRPL54Q6P161 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
MRPL54Q6P161 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
MRPL54Q6P161 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC13.15□□□□□ -0.3
MRPL54Q6P161 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
MRPL54Q6P161 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
MRPL54Q6P161 LYSMD4-203ENST00000378904 2122 ntBASIC13.15□□□□□ -0.3
MRPL54Q6P161 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC13.15□□□□□ -0.3
MRPL54Q6P161 ASL-204ENST00000395331 1538 ntTSL 5 BASIC13.15□□□□□ -0.3
MRPL54Q6P161 AL024508.2-201ENST00000607749 1894 ntBASIC13.15□□□□□ -0.3
MRPL54Q6P161 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
MRPL54Q6P161 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
MRPL54Q6P161 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.3
MRPL54Q6P161 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
MRPL54Q6P161 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
MRPL54Q6P161 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
MRPL54Q6P161 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
MRPL54Q6P161 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC13.15□□□□□ -0.3
MRPL54Q6P161 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
MRPL54Q6P161 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
MRPL54Q6P161 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
MRPL54Q6P161 NAT14-202ENST00000587400 416 ntTSL 5 BASIC13.15□□□□□ -0.3
MRPL54Q6P161 KLF2-202ENST00000592003 564 ntTSL 3 BASIC13.15□□□□□ -0.3
MRPL54Q6P161 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
MRPL54Q6P161 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
MRPL54Q6P161 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
MRPL54Q6P161 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
MRPL54Q6P161 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
MRPL54Q6P161 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
MRPL54Q6P161 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
MRPL54Q6P161 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
MRPL54Q6P161 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
MRPL54Q6P161 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
MRPL54Q6P161 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
MRPL54Q6P161 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
MRPL54Q6P161 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC13.15□□□□□ -0.3
MRPL54Q6P161 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
MRPL54Q6P161 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
MRPL54Q6P161 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
MRPL54Q6P161 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC13.15□□□□□ -0.3
MRPL54Q6P161 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
MRPL54Q6P161 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
MRPL54Q6P161 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC13.15□□□□□ -0.3
MRPL54Q6P161 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
MRPL54Q6P161 AC144831.1-201ENST00000573312 2656 ntBASIC13.15□□□□□ -0.31
MRPL54Q6P161 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.31
MRPL54Q6P161 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
MRPL54Q6P161 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.31
MRPL54Q6P161 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC13.15□□□□□ -0.31
MRPL54Q6P161 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC13.14□□□□□ -0.31
MRPL54Q6P161 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
MRPL54Q6P161 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
MRPL54Q6P161 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC13.14□□□□□ -0.31
MRPL54Q6P161 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
MRPL54Q6P161 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC13.14□□□□□ -0.31
MRPL54Q6P161 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
MRPL54Q6P161 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
MRPL54Q6P161 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC13.14□□□□□ -0.31
MRPL54Q6P161 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC13.14□□□□□ -0.31
MRPL54Q6P161 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
MRPL54Q6P161 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
MRPL54Q6P161 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
MRPL54Q6P161 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC13.14□□□□□ -0.31
MRPL54Q6P161 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
MRPL54Q6P161 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
MRPL54Q6P161 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
MRPL54Q6P161 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
MRPL54Q6P161 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
MRPL54Q6P161 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC13.14□□□□□ -0.31
MRPL54Q6P161 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC13.14□□□□□ -0.31
MRPL54Q6P161 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC13.14□□□□□ -0.31
MRPL54Q6P161 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
MRPL54Q6P161 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC13.14□□□□□ -0.31
MRPL54Q6P161 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC13.14□□□□□ -0.31
MRPL54Q6P161 THEM4-205ENST00000489410 643 ntTSL 2 BASIC13.14□□□□□ -0.31
MRPL54Q6P161 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC13.14□□□□□ -0.31
MRPL54Q6P161 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
MRPL54Q6P161 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC13.14□□□□□ -0.31
MRPL54Q6P161 VPS53-216ENST00000574029 585 ntTSL 4 BASIC13.14□□□□□ -0.31
MRPL54Q6P161 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
MRPL54Q6P161 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC13.14□□□□□ -0.31
MRPL54Q6P161 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
MRPL54Q6P161 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
MRPL54Q6P161 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
MRPL54Q6P161 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC13.14□□□□□ -0.31
MRPL54Q6P161 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
MRPL54Q6P161 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
MRPL54Q6P161 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
MRPL54Q6P161 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
MRPL54Q6P161 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
MRPL54Q6P161 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC13.14□□□□□ -0.31
MRPL54Q6P161 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC13.13□□□□□ -0.31
MRPL54Q6P161 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms