Protein–RNA interactions for Protein: Q6NVV3

NIPAL1, Magnesium transporter NIPA3, humanhuman

Predictions only

Length 410 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL1Q6NVV3 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NIPAL1Q6NVV3 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
NIPAL1Q6NVV3 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NIPAL1Q6NVV3 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC16.79■□□□□ 0.28
NIPAL1Q6NVV3 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
NIPAL1Q6NVV3 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NIPAL1Q6NVV3 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
NIPAL1Q6NVV3 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
NIPAL1Q6NVV3 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
NIPAL1Q6NVV3 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
NIPAL1Q6NVV3 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NIPAL1Q6NVV3 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
NIPAL1Q6NVV3 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC16.78■□□□□ 0.28
NIPAL1Q6NVV3 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NIPAL1Q6NVV3 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
NIPAL1Q6NVV3 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC16.78■□□□□ 0.28
NIPAL1Q6NVV3 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
NIPAL1Q6NVV3 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NIPAL1Q6NVV3 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NIPAL1Q6NVV3 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC16.78■□□□□ 0.28
NIPAL1Q6NVV3 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NIPAL1Q6NVV3 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
NIPAL1Q6NVV3 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
NIPAL1Q6NVV3 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
NIPAL1Q6NVV3 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
NIPAL1Q6NVV3 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NIPAL1Q6NVV3 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
NIPAL1Q6NVV3 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
NIPAL1Q6NVV3 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NIPAL1Q6NVV3 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC16.78■□□□□ 0.28
NIPAL1Q6NVV3 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC16.78■□□□□ 0.28
NIPAL1Q6NVV3 FOSL1P1-201ENST00000511041 816 ntBASIC16.78■□□□□ 0.28
NIPAL1Q6NVV3 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC16.78■□□□□ 0.28
NIPAL1Q6NVV3 AC111152.3-201ENST00000569699 673 ntBASIC16.78■□□□□ 0.28
NIPAL1Q6NVV3 MIR5100-201ENST00000579544 119 ntBASIC16.78■□□□□ 0.28
NIPAL1Q6NVV3 GZMM-202ENST00000592501 941 ntTSL 3 BASIC16.78■□□□□ 0.28
NIPAL1Q6NVV3 AC138894.3-201ENST00000603787 634 ntBASIC16.78■□□□□ 0.28
NIPAL1Q6NVV3 AL591684.3-201ENST00000605187 298 ntBASIC16.78■□□□□ 0.28
NIPAL1Q6NVV3 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NIPAL1Q6NVV3 LINC01451-201ENST00000623792 534 ntBASIC16.78■□□□□ 0.28
NIPAL1Q6NVV3 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
NIPAL1Q6NVV3 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC16.78■□□□□ 0.28
NIPAL1Q6NVV3 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NIPAL1Q6NVV3 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC16.78■□□□□ 0.28
NIPAL1Q6NVV3 AC100803.2-201ENST00000562459 1963 ntBASIC16.78■□□□□ 0.28
NIPAL1Q6NVV3 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NIPAL1Q6NVV3 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
NIPAL1Q6NVV3 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
NIPAL1Q6NVV3 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NIPAL1Q6NVV3 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
NIPAL1Q6NVV3 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
NIPAL1Q6NVV3 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NIPAL1Q6NVV3 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
NIPAL1Q6NVV3 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
NIPAL1Q6NVV3 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC16.78■□□□□ 0.28
NIPAL1Q6NVV3 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC16.77■□□□□ 0.28
NIPAL1Q6NVV3 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
NIPAL1Q6NVV3 AC009949.1-201ENST00000623048 1830 ntBASIC16.77■□□□□ 0.28
NIPAL1Q6NVV3 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
NIPAL1Q6NVV3 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC16.77■□□□□ 0.28
NIPAL1Q6NVV3 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
NIPAL1Q6NVV3 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
NIPAL1Q6NVV3 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
NIPAL1Q6NVV3 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
NIPAL1Q6NVV3 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.28
NIPAL1Q6NVV3 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
NIPAL1Q6NVV3 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC16.77■□□□□ 0.28
NIPAL1Q6NVV3 PCDH8P1-201ENST00000428983 2773 ntBASIC16.77■□□□□ 0.28
NIPAL1Q6NVV3 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
NIPAL1Q6NVV3 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC16.77■□□□□ 0.28
NIPAL1Q6NVV3 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
NIPAL1Q6NVV3 NUS1P2-201ENST00000417358 873 ntBASIC16.77■□□□□ 0.28
NIPAL1Q6NVV3 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC16.77■□□□□ 0.28
NIPAL1Q6NVV3 AC002558.1-201ENST00000488906 803 ntBASIC16.77■□□□□ 0.28
NIPAL1Q6NVV3 KRT18P31-201ENST00000506277 1292 ntBASIC16.77■□□□□ 0.28
NIPAL1Q6NVV3 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC16.77■□□□□ 0.28
NIPAL1Q6NVV3 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
NIPAL1Q6NVV3 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
NIPAL1Q6NVV3 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
NIPAL1Q6NVV3 AL691432.3-201ENST00000621860 400 ntBASIC16.77■□□□□ 0.28
NIPAL1Q6NVV3 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
NIPAL1Q6NVV3 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
NIPAL1Q6NVV3 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
NIPAL1Q6NVV3 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
NIPAL1Q6NVV3 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC16.77■□□□□ 0.27
NIPAL1Q6NVV3 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
NIPAL1Q6NVV3 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
NIPAL1Q6NVV3 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
NIPAL1Q6NVV3 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
NIPAL1Q6NVV3 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
NIPAL1Q6NVV3 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC16.77■□□□□ 0.27
NIPAL1Q6NVV3 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
NIPAL1Q6NVV3 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
NIPAL1Q6NVV3 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
NIPAL1Q6NVV3 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC16.76■□□□□ 0.27
NIPAL1Q6NVV3 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
NIPAL1Q6NVV3 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
NIPAL1Q6NVV3 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
NIPAL1Q6NVV3 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC16.76■□□□□ 0.27
NIPAL1Q6NVV3 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms