Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
RNF43Q68DV7 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
RNF43Q68DV7 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RNF43Q68DV7 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RNF43Q68DV7 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RNF43Q68DV7 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
RNF43Q68DV7 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC18.22■□□□□ 0.51
RNF43Q68DV7 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
RNF43Q68DV7 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RNF43Q68DV7 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
RNF43Q68DV7 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC18.22■□□□□ 0.51
RNF43Q68DV7 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
RNF43Q68DV7 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
RNF43Q68DV7 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
RNF43Q68DV7 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RNF43Q68DV7 SOD2-201ENST00000337404 991 ntTSL 2 BASIC18.22■□□□□ 0.51
RNF43Q68DV7 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
RNF43Q68DV7 AC005104.2-201ENST00000427818 678 ntBASIC18.22■□□□□ 0.51
RNF43Q68DV7 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
RNF43Q68DV7 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
RNF43Q68DV7 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC18.22■□□□□ 0.51
RNF43Q68DV7 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC18.22■□□□□ 0.51
RNF43Q68DV7 AL691403.2-201ENST00000618460 490 ntBASIC18.22■□□□□ 0.51
RNF43Q68DV7 AD001527.2-201ENST00000622994 785 ntBASIC18.22■□□□□ 0.51
RNF43Q68DV7 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RNF43Q68DV7 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC18.22■□□□□ 0.51
RNF43Q68DV7 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
RNF43Q68DV7 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RNF43Q68DV7 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
RNF43Q68DV7 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RNF43Q68DV7 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RNF43Q68DV7 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC18.22■□□□□ 0.51
RNF43Q68DV7 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
RNF43Q68DV7 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
RNF43Q68DV7 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC18.22■□□□□ 0.51
RNF43Q68DV7 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
RNF43Q68DV7 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RNF43Q68DV7 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
RNF43Q68DV7 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RNF43Q68DV7 ZNF259P1-201ENST00000407656 1365 ntBASIC18.21■□□□□ 0.51
RNF43Q68DV7 PAN3-AS1-201ENST00000563843 1351 ntBASIC18.21■□□□□ 0.51
RNF43Q68DV7 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
RNF43Q68DV7 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RNF43Q68DV7 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RNF43Q68DV7 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RNF43Q68DV7 FUOM-202ENST00000368551 628 ntTSL 3 BASIC18.21■□□□□ 0.51
RNF43Q68DV7 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RNF43Q68DV7 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC18.21■□□□□ 0.51
RNF43Q68DV7 AC018712.1-201ENST00000455767 687 ntBASIC18.21■□□□□ 0.51
RNF43Q68DV7 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC18.21■□□□□ 0.51
RNF43Q68DV7 RPL13AP23-201ENST00000480739 586 ntBASIC18.21■□□□□ 0.51
RNF43Q68DV7 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC18.21■□□□□ 0.51
RNF43Q68DV7 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RNF43Q68DV7 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC18.21■□□□□ 0.51
RNF43Q68DV7 MNT-208ENST00000575394 606 ntTSL 4 BASIC18.21■□□□□ 0.51
RNF43Q68DV7 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC18.21■□□□□ 0.51
RNF43Q68DV7 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
RNF43Q68DV7 AC073592.4-201ENST00000623827 446 ntBASIC18.21■□□□□ 0.51
RNF43Q68DV7 AC148477.8-201ENST00000624298 468 ntBASIC18.21■□□□□ 0.51
RNF43Q68DV7 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
RNF43Q68DV7 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RNF43Q68DV7 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
RNF43Q68DV7 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RNF43Q68DV7 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RNF43Q68DV7 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RNF43Q68DV7 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
RNF43Q68DV7 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RNF43Q68DV7 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC18.21■□□□□ 0.51
RNF43Q68DV7 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC18.21■□□□□ 0.51
RNF43Q68DV7 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
RNF43Q68DV7 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RNF43Q68DV7 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RNF43Q68DV7 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RNF43Q68DV7 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RNF43Q68DV7 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
RNF43Q68DV7 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RNF43Q68DV7 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC18.21■□□□□ 0.51
RNF43Q68DV7 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RNF43Q68DV7 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC18.21■□□□□ 0.5
RNF43Q68DV7 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RNF43Q68DV7 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
RNF43Q68DV7 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC18.2■□□□□ 0.5
RNF43Q68DV7 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
RNF43Q68DV7 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC18.2■□□□□ 0.5
RNF43Q68DV7 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RNF43Q68DV7 STK4-201ENST00000372801 2038 ntTSL 2 BASIC18.2■□□□□ 0.5
RNF43Q68DV7 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RNF43Q68DV7 AC243591.1-201ENST00000452967 1364 ntBASIC18.2■□□□□ 0.5
RNF43Q68DV7 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RNF43Q68DV7 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
RNF43Q68DV7 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
RNF43Q68DV7 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
RNF43Q68DV7 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC18.2■□□□□ 0.5
RNF43Q68DV7 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC18.2■□□□□ 0.5
RNF43Q68DV7 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RNF43Q68DV7 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RNF43Q68DV7 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
RNF43Q68DV7 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
RNF43Q68DV7 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RNF43Q68DV7 HMGN1P19-201ENST00000436976 333 ntBASIC18.2■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 91.8 ms