Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RIF1Q5UIP0 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC16.67■□□□□ 0.26
RIF1Q5UIP0 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RIF1Q5UIP0 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
RIF1Q5UIP0 PDIA3P1-201ENST00000471856 1510 ntBASIC16.67■□□□□ 0.26
RIF1Q5UIP0 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
RIF1Q5UIP0 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
RIF1Q5UIP0 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
RIF1Q5UIP0 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
RIF1Q5UIP0 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC16.67■□□□□ 0.26
RIF1Q5UIP0 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
RIF1Q5UIP0 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RIF1Q5UIP0 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RIF1Q5UIP0 APOC3-202ENST00000375345 604 ntTSL 5 BASIC16.67■□□□□ 0.26
RIF1Q5UIP0 AL355994.2-201ENST00000447882 704 ntBASIC16.67■□□□□ 0.26
RIF1Q5UIP0 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RIF1Q5UIP0 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC16.67■□□□□ 0.26
RIF1Q5UIP0 AC109635.5-201ENST00000533593 962 ntBASIC16.67■□□□□ 0.26
RIF1Q5UIP0 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
RIF1Q5UIP0 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
RIF1Q5UIP0 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RIF1Q5UIP0 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC16.66■□□□□ 0.26
RIF1Q5UIP0 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RIF1Q5UIP0 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC16.66■□□□□ 0.26
RIF1Q5UIP0 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RIF1Q5UIP0 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC16.66■□□□□ 0.26
RIF1Q5UIP0 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC16.66■□□□□ 0.26
RIF1Q5UIP0 AC104989.1-201ENST00000519711 778 ntBASIC16.66■□□□□ 0.26
RIF1Q5UIP0 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RIF1Q5UIP0 MMP17-203ENST00000535004 719 ntTSL 3 BASIC16.66■□□□□ 0.26
RIF1Q5UIP0 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC16.66■□□□□ 0.26
RIF1Q5UIP0 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC16.66■□□□□ 0.26
RIF1Q5UIP0 MIR6775-201ENST00000617557 69 ntBASIC16.66■□□□□ 0.26
RIF1Q5UIP0 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC16.66■□□□□ 0.26
RIF1Q5UIP0 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RIF1Q5UIP0 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
RIF1Q5UIP0 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
RIF1Q5UIP0 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
RIF1Q5UIP0 STX1A-203ENST00000395155 783 ntTSL 2 BASIC16.65■□□□□ 0.26
RIF1Q5UIP0 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RIF1Q5UIP0 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
RIF1Q5UIP0 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC16.65■□□□□ 0.26
RIF1Q5UIP0 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC16.65■□□□□ 0.26
RIF1Q5UIP0 WASH4P-201ENST00000564273 1246 ntBASIC16.65■□□□□ 0.26
RIF1Q5UIP0 AC008736.2-201ENST00000587554 516 ntTSL 2 BASIC16.65■□□□□ 0.26
RIF1Q5UIP0 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC16.65■□□□□ 0.26
RIF1Q5UIP0 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC16.65■□□□□ 0.26
RIF1Q5UIP0 TEX28P1-201ENST00000613479 1221 ntBASIC16.65■□□□□ 0.26
RIF1Q5UIP0 TEX28P2-201ENST00000617764 1221 ntBASIC16.65■□□□□ 0.26
RIF1Q5UIP0 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC16.65■□□□□ 0.26
RIF1Q5UIP0 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC16.65■□□□□ 0.26
RIF1Q5UIP0 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RIF1Q5UIP0 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
RIF1Q5UIP0 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
RIF1Q5UIP0 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RIF1Q5UIP0 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
RIF1Q5UIP0 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RIF1Q5UIP0 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC16.65■□□□□ 0.26
RIF1Q5UIP0 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RIF1Q5UIP0 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
RIF1Q5UIP0 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RIF1Q5UIP0 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC16.65■□□□□ 0.26
RIF1Q5UIP0 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC16.65■□□□□ 0.26
RIF1Q5UIP0 STK19B-204ENST00000512515 211 ntBASIC16.65■□□□□ 0.26
RIF1Q5UIP0 AC027307.2-201ENST00000591252 911 ntBASIC16.65■□□□□ 0.26
RIF1Q5UIP0 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RIF1Q5UIP0 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RIF1Q5UIP0 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
RIF1Q5UIP0 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RIF1Q5UIP0 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC16.65■□□□□ 0.26
RIF1Q5UIP0 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
RIF1Q5UIP0 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RIF1Q5UIP0 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RIF1Q5UIP0 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
RIF1Q5UIP0 AC009949.1-201ENST00000623048 1830 ntBASIC16.65■□□□□ 0.26
RIF1Q5UIP0 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
RIF1Q5UIP0 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
RIF1Q5UIP0 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
RIF1Q5UIP0 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.26
RIF1Q5UIP0 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
RIF1Q5UIP0 MIR1908-201ENST00000410394 80 ntBASIC16.64■□□□□ 0.26
RIF1Q5UIP0 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC16.64■□□□□ 0.26
RIF1Q5UIP0 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
RIF1Q5UIP0 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.26
RIF1Q5UIP0 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC16.64■□□□□ 0.26
RIF1Q5UIP0 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC16.64■□□□□ 0.25
RIF1Q5UIP0 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
RIF1Q5UIP0 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RIF1Q5UIP0 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
RIF1Q5UIP0 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RIF1Q5UIP0 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RIF1Q5UIP0 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RIF1Q5UIP0 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
RIF1Q5UIP0 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RIF1Q5UIP0 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RIF1Q5UIP0 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
RIF1Q5UIP0 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC16.64■□□□□ 0.25
RIF1Q5UIP0 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC16.64■□□□□ 0.25
RIF1Q5UIP0 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC16.64■□□□□ 0.25
RIF1Q5UIP0 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms