Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LRRK2Q5S007 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC14.88□□□□□ -0.03
LRRK2Q5S007 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LRRK2Q5S007 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC14.88□□□□□ -0.03
LRRK2Q5S007 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC14.88□□□□□ -0.03
LRRK2Q5S007 TPI1-206ENST00000488464 791 ntTSL 5 BASIC14.88□□□□□ -0.03
LRRK2Q5S007 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC14.88□□□□□ -0.03
LRRK2Q5S007 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC14.88□□□□□ -0.03
LRRK2Q5S007 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
LRRK2Q5S007 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
LRRK2Q5S007 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LRRK2Q5S007 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
LRRK2Q5S007 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LRRK2Q5S007 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC14.88□□□□□ -0.03
LRRK2Q5S007 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
LRRK2Q5S007 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
LRRK2Q5S007 BX276092.7-203ENST00000637198 1536 ntBASIC14.88□□□□□ -0.03
LRRK2Q5S007 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LRRK2Q5S007 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LRRK2Q5S007 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
LRRK2Q5S007 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
LRRK2Q5S007 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC14.88□□□□□ -0.03
LRRK2Q5S007 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC14.88□□□□□ -0.03
LRRK2Q5S007 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC14.88□□□□□ -0.03
LRRK2Q5S007 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC14.88□□□□□ -0.03
LRRK2Q5S007 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC14.88□□□□□ -0.03
LRRK2Q5S007 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC14.88□□□□□ -0.03
LRRK2Q5S007 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC14.88□□□□□ -0.03
LRRK2Q5S007 TMEM261P1-201ENST00000604899 340 ntBASIC14.88□□□□□ -0.03
LRRK2Q5S007 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC14.88□□□□□ -0.03
LRRK2Q5S007 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC14.88□□□□□ -0.03
LRRK2Q5S007 AC133552.6-201ENST00000613406 534 ntBASIC14.88□□□□□ -0.03
LRRK2Q5S007 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC14.88□□□□□ -0.03
LRRK2Q5S007 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC14.87□□□□□ -0.03
LRRK2Q5S007 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC14.87□□□□□ -0.03
LRRK2Q5S007 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LRRK2Q5S007 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LRRK2Q5S007 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
LRRK2Q5S007 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LRRK2Q5S007 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC14.87□□□□□ -0.03
LRRK2Q5S007 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LRRK2Q5S007 SPDYE19P-201ENST00000338590 713 ntBASIC14.87□□□□□ -0.03
LRRK2Q5S007 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC14.87□□□□□ -0.03
LRRK2Q5S007 AC234783.1-201ENST00000441761 496 ntBASIC14.87□□□□□ -0.03
LRRK2Q5S007 FOS-206ENST00000555347 1280 ntTSL 2 BASIC14.87□□□□□ -0.03
LRRK2Q5S007 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC14.87□□□□□ -0.03
LRRK2Q5S007 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
LRRK2Q5S007 PRR29-204ENST00000577953 565 ntTSL 4 BASIC14.87□□□□□ -0.03
LRRK2Q5S007 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC14.87□□□□□ -0.03
LRRK2Q5S007 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC14.87□□□□□ -0.03
LRRK2Q5S007 AC008735.3-201ENST00000596646 500 ntBASIC14.87□□□□□ -0.03
LRRK2Q5S007 TEX28P1-201ENST00000613479 1221 ntBASIC14.87□□□□□ -0.03
LRRK2Q5S007 TEX28P2-201ENST00000617764 1221 ntBASIC14.87□□□□□ -0.03
LRRK2Q5S007 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC14.87□□□□□ -0.03
LRRK2Q5S007 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LRRK2Q5S007 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
LRRK2Q5S007 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC14.87□□□□□ -0.03
LRRK2Q5S007 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LRRK2Q5S007 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
LRRK2Q5S007 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
LRRK2Q5S007 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LRRK2Q5S007 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC14.87□□□□□ -0.03
LRRK2Q5S007 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC14.87□□□□□ -0.03
LRRK2Q5S007 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC14.87□□□□□ -0.03
LRRK2Q5S007 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC14.87□□□□□ -0.03
LRRK2Q5S007 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC14.87□□□□□ -0.03
LRRK2Q5S007 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
LRRK2Q5S007 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC14.87□□□□□ -0.03
LRRK2Q5S007 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LRRK2Q5S007 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
LRRK2Q5S007 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
LRRK2Q5S007 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
LRRK2Q5S007 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC14.86□□□□□ -0.03
LRRK2Q5S007 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LRRK2Q5S007 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LRRK2Q5S007 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
LRRK2Q5S007 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
LRRK2Q5S007 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
LRRK2Q5S007 AL355994.2-201ENST00000447882 704 ntBASIC14.86□□□□□ -0.03
LRRK2Q5S007 AC099548.2-209ENST00000480264 625 ntBASIC14.86□□□□□ -0.03
LRRK2Q5S007 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC14.86□□□□□ -0.03
LRRK2Q5S007 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
LRRK2Q5S007 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
LRRK2Q5S007 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LRRK2Q5S007 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC14.86□□□□□ -0.03
LRRK2Q5S007 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC14.86□□□□□ -0.03
LRRK2Q5S007 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
LRRK2Q5S007 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
LRRK2Q5S007 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
LRRK2Q5S007 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LRRK2Q5S007 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LRRK2Q5S007 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC14.86□□□□□ -0.03
LRRK2Q5S007 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC14.86□□□□□ -0.03
LRRK2Q5S007 AC087499.6-201ENST00000411576 835 ntBASIC14.86□□□□□ -0.03
LRRK2Q5S007 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC14.86□□□□□ -0.03
LRRK2Q5S007 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
LRRK2Q5S007 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
LRRK2Q5S007 RHOQP1-201ENST00000555758 579 ntBASIC14.86□□□□□ -0.03
LRRK2Q5S007 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC14.86□□□□□ -0.03
LRRK2Q5S007 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC14.86□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms