Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
PDS5AQ29RF7 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PDS5AQ29RF7 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC20.66■□□□□ 0.9
PDS5AQ29RF7 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PDS5AQ29RF7 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
PDS5AQ29RF7 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PDS5AQ29RF7 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC20.66■□□□□ 0.9
PDS5AQ29RF7 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC20.66■□□□□ 0.9
PDS5AQ29RF7 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC20.66■□□□□ 0.9
PDS5AQ29RF7 DUX4L17-201ENST00000557360 1267 ntBASIC20.66■□□□□ 0.9
PDS5AQ29RF7 AP002472.1-201ENST00000577490 586 ntBASIC20.66■□□□□ 0.9
PDS5AQ29RF7 AC005412.3-201ENST00000580309 715 ntBASIC20.66■□□□□ 0.9
PDS5AQ29RF7 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC20.66■□□□□ 0.9
PDS5AQ29RF7 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
PDS5AQ29RF7 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC20.66■□□□□ 0.9
PDS5AQ29RF7 AC091812.2-201ENST00000619081 385 ntBASIC20.66■□□□□ 0.9
PDS5AQ29RF7 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC20.66■□□□□ 0.9
PDS5AQ29RF7 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PDS5AQ29RF7 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC20.66■□□□□ 0.9
PDS5AQ29RF7 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PDS5AQ29RF7 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PDS5AQ29RF7 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC20.66■□□□□ 0.9
PDS5AQ29RF7 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PDS5AQ29RF7 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
PDS5AQ29RF7 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
PDS5AQ29RF7 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC20.66■□□□□ 0.9
PDS5AQ29RF7 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PDS5AQ29RF7 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
PDS5AQ29RF7 AC134043.2-201ENST00000624206 2238 ntBASIC20.66■□□□□ 0.9
PDS5AQ29RF7 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PDS5AQ29RF7 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PDS5AQ29RF7 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC20.65■□□□□ 0.9
PDS5AQ29RF7 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PDS5AQ29RF7 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC20.65■□□□□ 0.9
PDS5AQ29RF7 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PDS5AQ29RF7 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
PDS5AQ29RF7 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
PDS5AQ29RF7 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PDS5AQ29RF7 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PDS5AQ29RF7 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC20.65■□□□□ 0.9
PDS5AQ29RF7 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC20.65■□□□□ 0.9
PDS5AQ29RF7 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC20.65■□□□□ 0.9
PDS5AQ29RF7 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC20.65■□□□□ 0.9
PDS5AQ29RF7 AC092902.6-201ENST00000641783 218 ntBASIC20.65■□□□□ 0.9
PDS5AQ29RF7 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PDS5AQ29RF7 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
PDS5AQ29RF7 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
PDS5AQ29RF7 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
PDS5AQ29RF7 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC20.65■□□□□ 0.9
PDS5AQ29RF7 AC093525.9-201ENST00000624961 1746 ntBASIC20.65■□□□□ 0.9
PDS5AQ29RF7 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC20.65■□□□□ 0.9
PDS5AQ29RF7 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PDS5AQ29RF7 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
PDS5AQ29RF7 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PDS5AQ29RF7 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
PDS5AQ29RF7 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
PDS5AQ29RF7 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
PDS5AQ29RF7 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC20.64■□□□□ 0.9
PDS5AQ29RF7 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC20.64■□□□□ 0.9
PDS5AQ29RF7 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
PDS5AQ29RF7 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
PDS5AQ29RF7 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
PDS5AQ29RF7 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
PDS5AQ29RF7 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PDS5AQ29RF7 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC20.64■□□□□ 0.89
PDS5AQ29RF7 FAM58CP-201ENST00000435741 640 ntBASIC20.64■□□□□ 0.89
PDS5AQ29RF7 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC20.64■□□□□ 0.89
PDS5AQ29RF7 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC20.64■□□□□ 0.89
PDS5AQ29RF7 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC20.64■□□□□ 0.89
PDS5AQ29RF7 PUS1-205ENST00000535067 838 ntTSL 3 BASIC20.64■□□□□ 0.89
PDS5AQ29RF7 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC20.64■□□□□ 0.89
PDS5AQ29RF7 AL031432.2-201ENST00000566714 459 ntBASIC20.64■□□□□ 0.89
PDS5AQ29RF7 AL928711.1-201ENST00000570165 459 ntBASIC20.64■□□□□ 0.89
PDS5AQ29RF7 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC20.64■□□□□ 0.89
PDS5AQ29RF7 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC20.64■□□□□ 0.89
PDS5AQ29RF7 BSG-214ENST00000614867 960 ntTSL 3 BASIC20.64■□□□□ 0.89
PDS5AQ29RF7 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
PDS5AQ29RF7 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PDS5AQ29RF7 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PDS5AQ29RF7 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
PDS5AQ29RF7 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
PDS5AQ29RF7 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
PDS5AQ29RF7 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
PDS5AQ29RF7 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC20.64■□□□□ 0.89
PDS5AQ29RF7 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
PDS5AQ29RF7 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PDS5AQ29RF7 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC20.63■□□□□ 0.89
PDS5AQ29RF7 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PDS5AQ29RF7 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC20.63■□□□□ 0.89
PDS5AQ29RF7 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PDS5AQ29RF7 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC20.63■□□□□ 0.89
PDS5AQ29RF7 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC20.63■□□□□ 0.89
PDS5AQ29RF7 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
PDS5AQ29RF7 ADH5P3-201ENST00000433842 1137 ntBASIC20.63■□□□□ 0.89
PDS5AQ29RF7 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
PDS5AQ29RF7 THTPA-204ENST00000554970 569 ntTSL 4 BASIC20.63■□□□□ 0.89
PDS5AQ29RF7 THTPA-206ENST00000556015 535 ntTSL 3 BASIC20.63■□□□□ 0.89
PDS5AQ29RF7 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
PDS5AQ29RF7 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
PDS5AQ29RF7 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC20.63■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms