Protein–RNA interactions for Protein: Q16720

ATP2B3, Plasma membrane calcium-transporting ATPase 3, humanhuman

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B3Q16720 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC21.24■□□□□ 0.99
ATP2B3Q16720 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC21.23■□□□□ 0.99
ATP2B3Q16720 NOC2LP2-201ENST00000407594 1944 ntBASIC21.23■□□□□ 0.99
ATP2B3Q16720 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
ATP2B3Q16720 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
ATP2B3Q16720 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
ATP2B3Q16720 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC21.23■□□□□ 0.99
ATP2B3Q16720 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
ATP2B3Q16720 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
ATP2B3Q16720 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
ATP2B3Q16720 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
ATP2B3Q16720 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC21.23■□□□□ 0.99
ATP2B3Q16720 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
ATP2B3Q16720 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
ATP2B3Q16720 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
ATP2B3Q16720 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
ATP2B3Q16720 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC21.23■□□□□ 0.99
ATP2B3Q16720 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC21.23■□□□□ 0.99
ATP2B3Q16720 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC21.23■□□□□ 0.99
ATP2B3Q16720 NMU-202ENST00000505262 693 ntTSL 3 BASIC21.23■□□□□ 0.99
ATP2B3Q16720 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC21.23■□□□□ 0.99
ATP2B3Q16720 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
ATP2B3Q16720 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC21.23■□□□□ 0.99
ATP2B3Q16720 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC21.23■□□□□ 0.99
ATP2B3Q16720 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
ATP2B3Q16720 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
ATP2B3Q16720 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
ATP2B3Q16720 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
ATP2B3Q16720 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
ATP2B3Q16720 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
ATP2B3Q16720 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
ATP2B3Q16720 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC21.22■□□□□ 0.99
ATP2B3Q16720 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
ATP2B3Q16720 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
ATP2B3Q16720 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
ATP2B3Q16720 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
ATP2B3Q16720 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
ATP2B3Q16720 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
ATP2B3Q16720 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
ATP2B3Q16720 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
ATP2B3Q16720 GNE-204ENST00000539208 2190 ntTSL 2 BASIC21.22■□□□□ 0.99
ATP2B3Q16720 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
ATP2B3Q16720 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
ATP2B3Q16720 AP002414.1-201ENST00000391405 1147 ntBASIC21.22■□□□□ 0.99
ATP2B3Q16720 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC21.22■□□□□ 0.99
ATP2B3Q16720 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC21.22■□□□□ 0.99
ATP2B3Q16720 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC21.22■□□□□ 0.99
ATP2B3Q16720 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC21.22■□□□□ 0.99
ATP2B3Q16720 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC21.22■□□□□ 0.99
ATP2B3Q16720 TCAP-202ENST00000578283 583 ntTSL 5 BASIC21.22■□□□□ 0.99
ATP2B3Q16720 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC21.22■□□□□ 0.99
ATP2B3Q16720 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC21.22■□□□□ 0.99
ATP2B3Q16720 AC064836.3-201ENST00000607928 673 ntBASIC21.22■□□□□ 0.99
ATP2B3Q16720 AC004790.2-201ENST00000623588 572 ntBASIC21.22■□□□□ 0.99
ATP2B3Q16720 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC21.22■□□□□ 0.99
ATP2B3Q16720 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC21.22■□□□□ 0.99
ATP2B3Q16720 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
ATP2B3Q16720 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
ATP2B3Q16720 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC21.22■□□□□ 0.99
ATP2B3Q16720 BCL2-203ENST00000589955 5011 ntBASIC21.22■□□□□ 0.99
ATP2B3Q16720 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
ATP2B3Q16720 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC21.22■□□□□ 0.99
ATP2B3Q16720 TNRC18P3-201ENST00000441896 2691 ntBASIC21.22■□□□□ 0.99
ATP2B3Q16720 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
ATP2B3Q16720 AC134043.2-201ENST00000624206 2238 ntBASIC21.21■□□□□ 0.99
ATP2B3Q16720 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
ATP2B3Q16720 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
ATP2B3Q16720 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
ATP2B3Q16720 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
ATP2B3Q16720 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
ATP2B3Q16720 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
ATP2B3Q16720 BEX3-201ENST00000361298 921 ntTSL 2 BASIC21.21■□□□□ 0.99
ATP2B3Q16720 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC21.21■□□□□ 0.99
ATP2B3Q16720 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
ATP2B3Q16720 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
ATP2B3Q16720 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC21.21■□□□□ 0.99
ATP2B3Q16720 RPP21-221ENST00000428040 594 ntTSL 2 BASIC21.21■□□□□ 0.99
ATP2B3Q16720 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC21.21■□□□□ 0.99
ATP2B3Q16720 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
ATP2B3Q16720 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC21.21■□□□□ 0.99
ATP2B3Q16720 RNA5SP416-201ENST00000516838 111 ntBASIC21.21■□□□□ 0.99
ATP2B3Q16720 CIPC-205ENST00000555437 566 ntTSL 3 BASIC21.21■□□□□ 0.99
ATP2B3Q16720 RIN3-211ENST00000557762 517 ntTSL 3 BASIC21.21■□□□□ 0.99
ATP2B3Q16720 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
ATP2B3Q16720 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC21.21■□□□□ 0.99
ATP2B3Q16720 MIR4751-201ENST00000578027 74 ntBASIC21.21■□□□□ 0.99
ATP2B3Q16720 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC21.21■□□□□ 0.99
ATP2B3Q16720 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
ATP2B3Q16720 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
ATP2B3Q16720 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
ATP2B3Q16720 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
ATP2B3Q16720 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
ATP2B3Q16720 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
ATP2B3Q16720 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
ATP2B3Q16720 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
ATP2B3Q16720 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC21.2■□□□□ 0.98
ATP2B3Q16720 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
ATP2B3Q16720 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
ATP2B3Q16720 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
ATP2B3Q16720 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms