Protein–RNA interactions for Protein: Q03591

CFHR1, Complement factor H-related protein 1, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFHR1Q03591 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
CFHR1Q03591 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC16.48■□□□□ 0.23
CFHR1Q03591 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC16.47■□□□□ 0.23
CFHR1Q03591 REM2-202ENST00000536884 1331 ntTSL 2 BASIC16.47■□□□□ 0.23
CFHR1Q03591 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CFHR1Q03591 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CFHR1Q03591 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
CFHR1Q03591 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC16.47■□□□□ 0.23
CFHR1Q03591 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CFHR1Q03591 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CFHR1Q03591 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CFHR1Q03591 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC16.47■□□□□ 0.23
CFHR1Q03591 AC015922.1-201ENST00000421102 1152 ntBASIC16.47■□□□□ 0.23
CFHR1Q03591 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC16.47■□□□□ 0.23
CFHR1Q03591 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC16.47■□□□□ 0.23
CFHR1Q03591 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC16.47■□□□□ 0.23
CFHR1Q03591 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC16.47■□□□□ 0.23
CFHR1Q03591 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CFHR1Q03591 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
CFHR1Q03591 AC069262.1-201ENST00000539058 672 ntBASIC16.47■□□□□ 0.23
CFHR1Q03591 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CFHR1Q03591 INO80C-206ENST00000586489 594 ntTSL 3 BASIC16.47■□□□□ 0.23
CFHR1Q03591 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC16.47■□□□□ 0.23
CFHR1Q03591 METTL23-205ENST00000588302 925 ntTSL 5 BASIC16.47■□□□□ 0.23
CFHR1Q03591 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
CFHR1Q03591 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CFHR1Q03591 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
CFHR1Q03591 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CFHR1Q03591 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CFHR1Q03591 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC16.47■□□□□ 0.23
CFHR1Q03591 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CFHR1Q03591 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC16.47■□□□□ 0.23
CFHR1Q03591 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
CFHR1Q03591 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC16.47■□□□□ 0.23
CFHR1Q03591 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
CFHR1Q03591 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
CFHR1Q03591 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC16.46■□□□□ 0.23
CFHR1Q03591 HNRNPRP1-201ENST00000453465 1695 ntBASIC16.46■□□□□ 0.23
CFHR1Q03591 AC133963.1-201ENST00000504166 1679 ntBASIC16.46■□□□□ 0.23
CFHR1Q03591 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CFHR1Q03591 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
CFHR1Q03591 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CFHR1Q03591 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CFHR1Q03591 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.23
CFHR1Q03591 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CFHR1Q03591 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CFHR1Q03591 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CFHR1Q03591 AL513480.1-201ENST00000451731 511 ntBASIC16.46■□□□□ 0.23
CFHR1Q03591 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CFHR1Q03591 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC16.46■□□□□ 0.23
CFHR1Q03591 AC107918.2-201ENST00000530817 355 ntBASIC16.46■□□□□ 0.23
CFHR1Q03591 RNF34-208ENST00000555076 593 ntTSL 3 BASIC16.46■□□□□ 0.23
CFHR1Q03591 CITED2-204ENST00000618718 901 ntTSL 2 BASIC16.46■□□□□ 0.23
CFHR1Q03591 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
CFHR1Q03591 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC16.46■□□□□ 0.23
CFHR1Q03591 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
CFHR1Q03591 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
CFHR1Q03591 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CFHR1Q03591 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC16.46■□□□□ 0.23
CFHR1Q03591 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CFHR1Q03591 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC16.46■□□□□ 0.23
CFHR1Q03591 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.22
CFHR1Q03591 AL390961.4-201ENST00000623958 2535 ntBASIC16.46■□□□□ 0.22
CFHR1Q03591 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
CFHR1Q03591 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
CFHR1Q03591 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.22
CFHR1Q03591 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
CFHR1Q03591 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CFHR1Q03591 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC16.45■□□□□ 0.22
CFHR1Q03591 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CFHR1Q03591 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC16.45■□□□□ 0.22
CFHR1Q03591 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CFHR1Q03591 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CFHR1Q03591 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC16.45■□□□□ 0.22
CFHR1Q03591 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CFHR1Q03591 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CFHR1Q03591 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CFHR1Q03591 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CFHR1Q03591 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC16.45■□□□□ 0.22
CFHR1Q03591 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CFHR1Q03591 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC16.45■□□□□ 0.22
CFHR1Q03591 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC16.45■□□□□ 0.22
CFHR1Q03591 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC16.45■□□□□ 0.22
CFHR1Q03591 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CFHR1Q03591 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC16.45■□□□□ 0.22
CFHR1Q03591 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC16.45■□□□□ 0.22
CFHR1Q03591 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
CFHR1Q03591 LSM12-202ENST00000585388 942 ntTSL 3 BASIC16.45■□□□□ 0.22
CFHR1Q03591 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CFHR1Q03591 AC068137.2-201ENST00000605408 478 ntBASIC16.45■□□□□ 0.22
CFHR1Q03591 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CFHR1Q03591 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CFHR1Q03591 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CFHR1Q03591 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CFHR1Q03591 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
CFHR1Q03591 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC16.45■□□□□ 0.22
CFHR1Q03591 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
CFHR1Q03591 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC16.45■□□□□ 0.22
CFHR1Q03591 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
CFHR1Q03591 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms