Protein–RNA interactions for Protein: Q00532

CDKL1, Cyclin-dependent kinase-like 1, humanhuman

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL1Q00532 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
CDKL1Q00532 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDKL1Q00532 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC17.11■□□□□ 0.33
CDKL1Q00532 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC17.11■□□□□ 0.33
CDKL1Q00532 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDKL1Q00532 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
CDKL1Q00532 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CDKL1Q00532 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CDKL1Q00532 AL049757.1-201ENST00000616842 1596 ntBASIC17.11■□□□□ 0.33
CDKL1Q00532 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDKL1Q00532 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CDKL1Q00532 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDKL1Q00532 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CDKL1Q00532 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC17.1■□□□□ 0.33
CDKL1Q00532 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDKL1Q00532 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDKL1Q00532 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC17.1■□□□□ 0.33
CDKL1Q00532 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC17.1■□□□□ 0.33
CDKL1Q00532 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC17.1■□□□□ 0.33
CDKL1Q00532 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDKL1Q00532 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDKL1Q00532 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDKL1Q00532 CTNS-203ENST00000399306 803 ntTSL 3 BASIC17.1■□□□□ 0.33
CDKL1Q00532 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDKL1Q00532 COPS8-203ENST00000409334 794 ntTSL 5 BASIC17.1■□□□□ 0.33
CDKL1Q00532 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC17.1■□□□□ 0.33
CDKL1Q00532 CDV3-207ENST00000508481 661 ntTSL 3 BASIC17.1■□□□□ 0.33
CDKL1Q00532 KRT18P35-201ENST00000510488 1269 ntBASIC17.1■□□□□ 0.33
CDKL1Q00532 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
CDKL1Q00532 AC111152.3-201ENST00000569699 673 ntBASIC17.1■□□□□ 0.33
CDKL1Q00532 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDKL1Q00532 AC109462.3-201ENST00000573934 613 ntBASIC17.1■□□□□ 0.33
CDKL1Q00532 AP002414.4-201ENST00000589764 1148 ntBASIC17.1■□□□□ 0.33
CDKL1Q00532 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CDKL1Q00532 AC091076.1-201ENST00000610741 619 ntBASIC17.1■□□□□ 0.33
CDKL1Q00532 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDKL1Q00532 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC17.1■□□□□ 0.33
CDKL1Q00532 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDKL1Q00532 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDKL1Q00532 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CDKL1Q00532 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC17.1■□□□□ 0.33
CDKL1Q00532 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDKL1Q00532 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDKL1Q00532 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
CDKL1Q00532 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
CDKL1Q00532 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDKL1Q00532 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
CDKL1Q00532 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDKL1Q00532 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CDKL1Q00532 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC17.09■□□□□ 0.33
CDKL1Q00532 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDKL1Q00532 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
CDKL1Q00532 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CDKL1Q00532 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDKL1Q00532 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC17.09■□□□□ 0.33
CDKL1Q00532 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDKL1Q00532 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CDKL1Q00532 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
CDKL1Q00532 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDKL1Q00532 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDKL1Q00532 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC17.09■□□□□ 0.33
CDKL1Q00532 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC17.09■□□□□ 0.33
CDKL1Q00532 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CDKL1Q00532 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
CDKL1Q00532 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC17.09■□□□□ 0.33
CDKL1Q00532 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
CDKL1Q00532 TK1-204ENST00000590430 683 ntTSL 3 BASIC17.09■□□□□ 0.33
CDKL1Q00532 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC17.09■□□□□ 0.33
CDKL1Q00532 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDKL1Q00532 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDKL1Q00532 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC17.09■□□□□ 0.33
CDKL1Q00532 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC17.09■□□□□ 0.33
CDKL1Q00532 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDKL1Q00532 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDKL1Q00532 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC17.09■□□□□ 0.33
CDKL1Q00532 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC17.09■□□□□ 0.33
CDKL1Q00532 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CDKL1Q00532 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
CDKL1Q00532 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC17.09■□□□□ 0.33
CDKL1Q00532 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDKL1Q00532 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDKL1Q00532 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
CDKL1Q00532 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC17.09■□□□□ 0.33
CDKL1Q00532 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDKL1Q00532 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDKL1Q00532 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
CDKL1Q00532 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
CDKL1Q00532 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CDKL1Q00532 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
CDKL1Q00532 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC17.08■□□□□ 0.33
CDKL1Q00532 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
CDKL1Q00532 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CDKL1Q00532 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC17.08■□□□□ 0.33
CDKL1Q00532 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
CDKL1Q00532 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CDKL1Q00532 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CDKL1Q00532 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CDKL1Q00532 AL353593.2-201ENST00000602529 1483 ntBASIC17.08■□□□□ 0.32
CDKL1Q00532 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC17.08■□□□□ 0.32
CDKL1Q00532 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms