Protein–RNA interactions for Protein: P78556

CCL20, C-C motif chemokine 20, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20P78556 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CCL20P78556 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CCL20P78556 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CCL20P78556 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC13.69□□□□□ -0.22
CCL20P78556 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC13.69□□□□□ -0.22
CCL20P78556 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC13.69□□□□□ -0.22
CCL20P78556 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC13.69□□□□□ -0.22
CCL20P78556 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CCL20P78556 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CCL20P78556 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC13.69□□□□□ -0.22
CCL20P78556 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC13.69□□□□□ -0.22
CCL20P78556 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CCL20P78556 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
CCL20P78556 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC13.69□□□□□ -0.22
CCL20P78556 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC13.69□□□□□ -0.22
CCL20P78556 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC13.69□□□□□ -0.22
CCL20P78556 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
CCL20P78556 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CCL20P78556 BLK-205ENST00000529894 2017 ntTSL 5 BASIC13.69□□□□□ -0.22
CCL20P78556 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CCL20P78556 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC13.69□□□□□ -0.22
CCL20P78556 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CCL20P78556 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC13.68□□□□□ -0.22
CCL20P78556 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
CCL20P78556 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC13.68□□□□□ -0.22
CCL20P78556 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC13.68□□□□□ -0.22
CCL20P78556 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CCL20P78556 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
CCL20P78556 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
CCL20P78556 AC099063.4-201ENST00000641099 1602 ntBASIC13.68□□□□□ -0.22
CCL20P78556 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC13.68□□□□□ -0.22
CCL20P78556 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CCL20P78556 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
CCL20P78556 C1R-202ENST00000536053 2347 ntTSL 2 BASIC13.68□□□□□ -0.22
CCL20P78556 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC13.68□□□□□ -0.22
CCL20P78556 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CCL20P78556 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
CCL20P78556 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC13.68□□□□□ -0.22
CCL20P78556 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC13.68□□□□□ -0.22
CCL20P78556 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC13.68□□□□□ -0.22
CCL20P78556 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC13.68□□□□□ -0.22
CCL20P78556 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CCL20P78556 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
CCL20P78556 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CCL20P78556 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CCL20P78556 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
CCL20P78556 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC13.68□□□□□ -0.22
CCL20P78556 MIR663A-201ENST00000385250 93 ntBASIC13.68□□□□□ -0.22
CCL20P78556 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CCL20P78556 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC13.68□□□□□ -0.22
CCL20P78556 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
CCL20P78556 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC13.68□□□□□ -0.22
CCL20P78556 AC083906.2-201ENST00000511578 360 ntBASIC13.68□□□□□ -0.22
CCL20P78556 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC13.68□□□□□ -0.22
CCL20P78556 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC13.68□□□□□ -0.22
CCL20P78556 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
CCL20P78556 AC083880.1-201ENST00000608266 535 ntBASIC13.68□□□□□ -0.22
CCL20P78556 MIR6821-201ENST00000617625 74 ntBASIC13.68□□□□□ -0.22
CCL20P78556 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CCL20P78556 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
CCL20P78556 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
CCL20P78556 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
CCL20P78556 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
CCL20P78556 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
CCL20P78556 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CCL20P78556 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
CCL20P78556 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CCL20P78556 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CCL20P78556 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC13.68□□□□□ -0.22
CCL20P78556 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
CCL20P78556 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CCL20P78556 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC13.67□□□□□ -0.22
CCL20P78556 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC13.67□□□□□ -0.22
CCL20P78556 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CCL20P78556 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CCL20P78556 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC13.67□□□□□ -0.22
CCL20P78556 NID2-208ENST00000617139 3827 ntTSL 5 BASIC13.67□□□□□ -0.22
CCL20P78556 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
CCL20P78556 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC13.67□□□□□ -0.22
CCL20P78556 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CCL20P78556 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CCL20P78556 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CCL20P78556 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CCL20P78556 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CCL20P78556 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC13.67□□□□□ -0.22
CCL20P78556 KRT8P7-201ENST00000533003 1432 ntBASIC13.67□□□□□ -0.22
CCL20P78556 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
CCL20P78556 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC13.67□□□□□ -0.22
CCL20P78556 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
CCL20P78556 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CCL20P78556 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CCL20P78556 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
CCL20P78556 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CCL20P78556 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
CCL20P78556 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC13.67□□□□□ -0.22
CCL20P78556 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CCL20P78556 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CCL20P78556 GUK1-205ENST00000366722 850 ntTSL 3 BASIC13.67□□□□□ -0.22
CCL20P78556 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC13.67□□□□□ -0.22
CCL20P78556 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms