Protein–RNA interactions for Protein: P61009

SPCS3, Signal peptidase complex subunit 3, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3P61009 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SPCS3P61009 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC14.18□□□□□ -0.14
SPCS3P61009 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SPCS3P61009 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SPCS3P61009 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SPCS3P61009 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SPCS3P61009 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SPCS3P61009 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SPCS3P61009 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
SPCS3P61009 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC14.18□□□□□ -0.14
SPCS3P61009 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC14.18□□□□□ -0.14
SPCS3P61009 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SPCS3P61009 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SPCS3P61009 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC14.18□□□□□ -0.14
SPCS3P61009 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
SPCS3P61009 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SPCS3P61009 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SPCS3P61009 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
SPCS3P61009 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SPCS3P61009 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC14.17□□□□□ -0.14
SPCS3P61009 LYSMD4-203ENST00000378904 2122 ntBASIC14.17□□□□□ -0.14
SPCS3P61009 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
SPCS3P61009 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SPCS3P61009 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
SPCS3P61009 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
SPCS3P61009 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC14.17□□□□□ -0.14
SPCS3P61009 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SPCS3P61009 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SPCS3P61009 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SPCS3P61009 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
SPCS3P61009 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC14.17□□□□□ -0.14
SPCS3P61009 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
SPCS3P61009 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC14.17□□□□□ -0.14
SPCS3P61009 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC14.17□□□□□ -0.14
SPCS3P61009 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
SPCS3P61009 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC14.17□□□□□ -0.14
SPCS3P61009 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC14.17□□□□□ -0.14
SPCS3P61009 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC14.17□□□□□ -0.14
SPCS3P61009 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
SPCS3P61009 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC14.17□□□□□ -0.14
SPCS3P61009 USF2-205ENST00000594064 1179 ntTSL 2 BASIC14.17□□□□□ -0.14
SPCS3P61009 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC14.17□□□□□ -0.14
SPCS3P61009 FAM87A-204ENST00000613235 858 ntBASIC14.17□□□□□ -0.14
SPCS3P61009 AC009154.2-201ENST00000621177 724 ntBASIC14.17□□□□□ -0.14
SPCS3P61009 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC14.17□□□□□ -0.14
SPCS3P61009 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
SPCS3P61009 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
SPCS3P61009 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC14.17□□□□□ -0.14
SPCS3P61009 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SPCS3P61009 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
SPCS3P61009 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
SPCS3P61009 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SPCS3P61009 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SPCS3P61009 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SPCS3P61009 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC14.17□□□□□ -0.14
SPCS3P61009 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SPCS3P61009 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
SPCS3P61009 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
SPCS3P61009 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SPCS3P61009 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SPCS3P61009 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC14.17□□□□□ -0.14
SPCS3P61009 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC14.17□□□□□ -0.14
SPCS3P61009 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC14.17□□□□□ -0.14
SPCS3P61009 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SPCS3P61009 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SPCS3P61009 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC14.17□□□□□ -0.14
SPCS3P61009 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SPCS3P61009 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SPCS3P61009 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
SPCS3P61009 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
SPCS3P61009 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SPCS3P61009 PCDHB17P-201ENST00000539533 2393 ntBASIC14.16□□□□□ -0.14
SPCS3P61009 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC14.16□□□□□ -0.14
SPCS3P61009 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SPCS3P61009 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC14.16□□□□□ -0.14
SPCS3P61009 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
SPCS3P61009 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SPCS3P61009 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
SPCS3P61009 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SPCS3P61009 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC14.16□□□□□ -0.14
SPCS3P61009 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SPCS3P61009 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC14.16□□□□□ -0.14
SPCS3P61009 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
SPCS3P61009 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC14.16□□□□□ -0.14
SPCS3P61009 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
SPCS3P61009 AC010947.1-201ENST00000623454 693 ntBASIC14.16□□□□□ -0.14
SPCS3P61009 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC14.16□□□□□ -0.14
SPCS3P61009 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC14.16□□□□□ -0.14
SPCS3P61009 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
SPCS3P61009 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC14.16□□□□□ -0.14
SPCS3P61009 CYP2D8P-201ENST00000433633 1490 ntBASIC14.16□□□□□ -0.14
SPCS3P61009 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SPCS3P61009 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SPCS3P61009 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SPCS3P61009 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC14.16□□□□□ -0.14
SPCS3P61009 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SPCS3P61009 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
SPCS3P61009 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SPCS3P61009 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SPCS3P61009 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms