Protein–RNA interactions for Protein: P59091

LINC00315, Putative uncharacterized protein encoded by LINC00315, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00315P59091 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC12.51□□□□□ -0.41
LINC00315P59091 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
LINC00315P59091 LITAF-220ENST00000620789 692 ntTSL 5 BASIC12.51□□□□□ -0.41
LINC00315P59091 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC12.51□□□□□ -0.41
LINC00315P59091 ANKRD20A8P-203ENST00000641373 517 ntBASIC12.51□□□□□ -0.41
LINC00315P59091 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC12.51□□□□□ -0.41
LINC00315P59091 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
LINC00315P59091 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
LINC00315P59091 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC00315P59091 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
LINC00315P59091 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
LINC00315P59091 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC00315P59091 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC00315P59091 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
LINC00315P59091 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
LINC00315P59091 AC010460.3-201ENST00000511359 1579 ntBASIC12.51□□□□□ -0.41
LINC00315P59091 AC092171.3-201ENST00000610122 2651 ntBASIC12.51□□□□□ -0.41
LINC00315P59091 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
LINC00315P59091 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
LINC00315P59091 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
LINC00315P59091 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC00315P59091 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LINC00315P59091 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
LINC00315P59091 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
LINC00315P59091 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LINC00315P59091 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
LINC00315P59091 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LINC00315P59091 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC12.5□□□□□ -0.41
LINC00315P59091 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LINC00315P59091 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
LINC00315P59091 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
LINC00315P59091 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LINC00315P59091 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LINC00315P59091 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC12.5□□□□□ -0.41
LINC00315P59091 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
LINC00315P59091 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LINC00315P59091 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
LINC00315P59091 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC12.5□□□□□ -0.41
LINC00315P59091 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC12.5□□□□□ -0.41
LINC00315P59091 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC12.5□□□□□ -0.41
LINC00315P59091 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC12.5□□□□□ -0.41
LINC00315P59091 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC12.5□□□□□ -0.41
LINC00315P59091 NAA38-203ENST00000575071 553 ntTSL 2 BASIC12.5□□□□□ -0.41
LINC00315P59091 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC12.5□□□□□ -0.41
LINC00315P59091 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC12.5□□□□□ -0.41
LINC00315P59091 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC12.5□□□□□ -0.41
LINC00315P59091 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
LINC00315P59091 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
LINC00315P59091 AL353692.3-201ENST00000407031 1396 ntBASIC12.5□□□□□ -0.41
LINC00315P59091 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LINC00315P59091 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LINC00315P59091 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
LINC00315P59091 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LINC00315P59091 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LINC00315P59091 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
LINC00315P59091 AC092068.3-201ENST00000587894 2016 ntBASIC12.5□□□□□ -0.41
LINC00315P59091 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LINC00315P59091 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC12.5□□□□□ -0.41
LINC00315P59091 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
LINC00315P59091 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC12.5□□□□□ -0.41
LINC00315P59091 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC12.5□□□□□ -0.41
LINC00315P59091 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LINC00315P59091 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
LINC00315P59091 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LINC00315P59091 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC12.5□□□□□ -0.41
LINC00315P59091 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC12.5□□□□□ -0.41
LINC00315P59091 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
LINC00315P59091 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC00315P59091 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
LINC00315P59091 AL139384.1-201ENST00000612143 3047 ntBASIC12.49□□□□□ -0.41
LINC00315P59091 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC12.49□□□□□ -0.41
LINC00315P59091 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC12.49□□□□□ -0.41
LINC00315P59091 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC12.49□□□□□ -0.41
LINC00315P59091 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC00315P59091 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC00315P59091 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC00315P59091 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
LINC00315P59091 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC12.49□□□□□ -0.41
LINC00315P59091 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC12.49□□□□□ -0.41
LINC00315P59091 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC00315P59091 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC00315P59091 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
LINC00315P59091 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC12.49□□□□□ -0.41
LINC00315P59091 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC00315P59091 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
LINC00315P59091 HCG4P8-203ENST00000443049 980 ntBASIC12.49□□□□□ -0.41
LINC00315P59091 SPDYE13P-201ENST00000445314 798 ntBASIC12.49□□□□□ -0.41
LINC00315P59091 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC12.49□□□□□ -0.41
LINC00315P59091 PON3-205ENST00000451904 1053 ntTSL 3 BASIC12.49□□□□□ -0.41
LINC00315P59091 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC12.49□□□□□ -0.41
LINC00315P59091 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC12.49□□□□□ -0.41
LINC00315P59091 KRT18P56-201ENST00000507275 550 ntBASIC12.49□□□□□ -0.41
LINC00315P59091 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
LINC00315P59091 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC12.49□□□□□ -0.41
LINC00315P59091 AC019129.2-201ENST00000609837 1235 ntBASIC12.49□□□□□ -0.41
LINC00315P59091 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
LINC00315P59091 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC00315P59091 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC00315P59091 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC00315P59091 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms